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blachlylab
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dhtslib
D bindings and OOP wrappers for htslib
MIT License
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GFF3Reader can't handle with comment lines in middle of file
#140
charlesgregory
opened
1 year ago
0
VCFRecord.filter doesn't return correct set of filters
#139
charlesgregory
opened
2 years ago
2
Thread pool
#138
charlesgregory
opened
2 years ago
2
v0.14.0+htslib-1.16
#137
charlesgregory
closed
2 years ago
1
Update htslib bindings to Htslib 1.16
#136
charlesgregory
closed
2 years ago
4
Update bindings to Htslib 1.15
#135
charlesgregory
closed
2 years ago
0
Update bindings to Htslib 1.14
#134
charlesgregory
closed
2 years ago
0
Rework reader/writers to use HtslibIterator and HtslibFile across dhtslib
#133
charlesgregory
opened
2 years ago
0
Update bindings to htslib 1.15
#132
charlesgregory
opened
2 years ago
0
Release v0.14.0+htslib-1.13
#131
charlesgregory
closed
2 years ago
1
Update the Dstep folder after #129
#130
charlesgregory
closed
2 years ago
1
Dstep Bindings V2
#129
charlesgregory
closed
2 years ago
1
HtslibFile and HtslibIterator
#128
charlesgregory
closed
2 years ago
1
bam_aux_update_int fails non-deterministically
#127
charlesgregory
opened
2 years ago
0
Test DMD compiler and MacOS via github actions
#126
charlesgregory
closed
2 years ago
1
Vcf improvements and fixes
#125
charlesgregory
closed
2 years ago
2
FormatField can return strings with NULs
#124
charlesgregory
closed
2 years ago
0
Linker postblit fix
#123
charlesgregory
closed
2 years ago
2
Linker issues when using SAMRecord in an array
#122
charlesgregory
closed
2 years ago
4
Updates to dstep bindings generation
#121
charlesgregory
closed
2 years ago
4
Version check warning
#120
charlesgregory
opened
2 years ago
1
Solidify process of updating bindings
#119
charlesgregory
closed
2 years ago
3
Update bindings to htslib 1.14
#118
charlesgregory
opened
2 years ago
0
VCFWriter output modes
#117
charlesgregory
closed
2 years ago
0
VCFWriter ctor incorrect
#116
charlesgregory
closed
2 years ago
4
Get valid coordinates from Interval
#115
charlesgregory
opened
2 years ago
1
Interval length
#114
charlesgregory
closed
2 years ago
0
Release v0.13.3+htslib-1.13
#113
charlesgregory
closed
2 years ago
1
GFF3 coordinate offsets don't make sense
#112
jblachly
opened
2 years ago
3
Coordinate subpackage
#111
charlesgregory
closed
2 years ago
2
Make iterator-wrapping Ranges into Forward Ranges
#110
charlesgregory
closed
2 years ago
0
Htslib package changes
#109
charlesgregory
closed
2 years ago
2
Reference Counting fixes and consolidation
#108
charlesgregory
closed
2 years ago
12
Reference counting implementation is incorrect
#107
charlesgregory
closed
2 years ago
5
Convert integration unit tests to true unit tests
#106
charlesgregory
opened
3 years ago
0
VCF Overhaul
#105
charlesgregory
closed
2 years ago
3
Isolate coordinates.d
#104
charlesgregory
closed
2 years ago
2
memory leak in `sam.RecordRange`
#103
jblachly
closed
3 years ago
0
Rebranding (name change)
#102
jblachly
opened
3 years ago
4
`Interval` (and `Coordinate`) should probably include contig name
#101
jblachly
opened
3 years ago
0
Bai index warning sometimes unnecessary
#100
charlesgregory
closed
3 years ago
1
Functional style `Optional` and `Result` return types
#99
jblachly
opened
3 years ago
0
hts_parse_region binding may be wrong
#98
charlesgregory
closed
2 years ago
1
htslib unittests
#97
charlesgregory
opened
3 years ago
1
VCF Overhaul
#96
charlesgregory
closed
2 years ago
0
Default dub configuration
#95
charlesgregory
closed
3 years ago
1
dhtslib.vcf.record poor test coverage
#94
jblachly
closed
2 years ago
1
dhtslib versioning
#93
charlesgregory
closed
3 years ago
1
getAlignedPairs doesn't use Coordinates
#92
charlesgregory
closed
2 years ago
1
rust-htslib `read_pos`
#91
jblachly
opened
3 years ago
2
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