bmrb-io nmr-star-dictionary issues

bmrb-io / nmr-star-dictionary

The official NMR-STAR dictionary in use by the BMRB.

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issues

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Dictionary: Data item starting with Data should be quoted (possibly)

#65 epeisach opened 3 years ago
3
3.2.14.0 dictionary Save_frame_category missing data items

#64 epeisach opened 3 years ago
3
category_group_list is missing definitions for groups that are present...

#63 epeisach closed 4 years ago
2
mmcif - nmr-star mapping to remove

#62 dmaziuk closed 4 years ago
1
mmcif - nmr-star mapping to remove

#61 dmaziuk closed 4 years ago
1
mmcif - nmr-star mapping to add

#60 dmaziuk closed 4 years ago
1
mmcif - nmr-star mapping to remove

#59 dmaziuk closed 4 years ago
2
nmr_cif_match.csv lost

#58 dmaziuk closed 4 years ago
1
Extend NMR-STAR internal dictionary to accomodate the original NEF nomenclature in distance restraints

#57 dmaziuk opened 4 years ago
1
_Order_param.Model_fit has ? in enumeration

#56 epeisach closed 4 years ago
3
NMR-STAR.dic is 3.2.1.18, misses release date in _dictionary_history.update

#55 epeisach opened 4 years ago
0
_Software_applied_history.Sf_ID, MS_chromatogram_list.Sf_ID, _MZ_ratio_data_list.Sf_ID, _Other_constraint_list.Sf_ID, _SAXS_constraint_list.Sf_ID, _Peak_constraint_link_list.Sf_ID, and more have empty parent/child

#54 epeisach opened 4 years ago
1
Theoretical_cross_correlation_DD_list.ID - mixing parent/child with definition and missing spaces between quotes

#53 epeisach opened 4 years ago
1
Provide atomic coordinates as an option for data file upload content

#52 elulrich opened 4 years ago
0
Document describing NMR-STAR versioning needs to be put on GitHub

#51 elulrich opened 4 years ago
0
Public file confusion

#50 kumar-physics opened 4 years ago
1
Auto relaxation - check enumerations for temperature calibration method

#49 elulrich closed 4 years ago
1
reported relaxation data type in auto relaxation is missing T1, etc in enumerations

#48 elulrich closed 4 years ago
1
Add enumerations for computing platform locations

#47 elulrich closed 4 years ago
1
Edit molecular entity save frame description

#45 elulrich opened 4 years ago
1
Edit Ligand save frame description

#46 elulrich opened 4 years ago
1
Check asym ID relational links with Struct_asym.ID

#43 elulrich opened 4 years ago
1
Add 19F chemical shift referencing to chem shift ref save frame

#42 elulrich closed 4 years ago
1
Add tag for chemical shift referencing to appropriate save frames

#41 elulrich opened 4 years ago
0
Add atomic coordinate data file field to appropriate save frames

#40 elulrich closed 4 years ago
1
Binding data - should Kd/Ka/IC50 be selectable?

#39 elulrich opened 4 years ago
0
D/H fractionation factor - should this be in deposition system?

#38 elulrich closed 4 years ago
1
pH titration primary data - observed NMR parameter mandatory?

#37 elulrich opened 4 years ago
0
pKa or pHmid needs to be selectable

#36 elulrich opened 4 years ago
0
Order parameters linked to relaxation data used to derive the values

#35 elulrich opened 4 years ago
0
Update enumerations for auto relaxation data type

#34 elulrich closed 4 years ago
1
Add atomic coordinates to BMRBdep for macromolecules

#33 elulrich closed 4 years ago
1
Add tag for other experimental methods used (FRET, EMR, etc.)

#32 elulrich opened 4 years ago
0
Add tags for linking dynamics trajectories and movies in deposition system

#31 elulrich opened 4 years ago
0
Atomic coordinates should not appear in data selection list

#44 elulrich closed 4 years ago
1
Add 1D experiments to Experiment.name enumerations

#29 elulrich closed 4 years ago
1
Make 'reference' save frame visible

#30 elulrich opened 4 years ago
0
SSNMR sample description

#28 kumar-physics opened 4 years ago
0
_Assembly_interaction difficult to use

#27 jonwedell closed 4 years ago
1
Move _Citation.DOI below _Citation.PubMed_ID

#26 jonwedell closed 5 years ago
2
Update the enumerations file to nmrstar v3

#25 jonwedell closed 5 years ago
1
_Peak_row_format.Position_5 and .Position_uncertainty_5 are missing

#24 yokochi47 closed 4 years ago
2
Can we remove the default value of 'PDB' from _Assembly_db_link.Database_code?

#23 jonwedell closed 4 years ago
8
Update units

#22 kumar-physics closed 4 years ago
1
New conditional rule

#21 jonwedell closed 5 years ago
5
Chain Identifiers Under Molecular Entity

#18 rsiegl closed 5 years ago
4
_Task.Software_module has no value for Prompt

#16 jonwedell closed 5 years ago
2
Make section for FRET (fluorescence experiment) visible

#20 elulrich opened 5 years ago
1
_Entry.NMR_STAR_dict_location has wrong value for 'User full view'

#15 jonwedell closed 5 years ago
0
Remove default value of "not applicable" from _Chem_comp.Image_file_name

#14 jonwedell closed 5 years ago
0