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broadinstitute
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HydrantFC
Repository for the FireCloud version of Hydrant (currently in alpha testing)
BSD 3-Clause "New" or "Revised" License
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Hydrant test will fail on Debian due to incompatible awk
#41
ajdunford
opened
3 years ago
0
Is Dockstore supported?
#40
lynnlangit
opened
5 years ago
3
Updated runcromw.sh
#39
dheiman
closed
5 years ago
0
Hotfix 4.0.a6
#38
dheiman
closed
6 years ago
0
RFE: Consider using TOML for config files
#37
dheiman
opened
6 years ago
0
Added auto-installation of gcr.io credential helpers when missing
#36
dheiman
closed
6 years ago
0
Ensure user has permission to write to docker namespace
#35
dheiman
opened
6 years ago
0
RFE: enable initialization in an existing directory
#34
dheiman
opened
6 years ago
0
RFE: automate the entire deployment cycle
#33
noblem
opened
6 years ago
0
Add FireCloud ACLs to install and update cromwell to 31
#32
dheiman
closed
6 years ago
0
Priority Use Case: philosopher from UMich (CPTAC)
#31
noblem
closed
6 years ago
1
Add ACL lists to configs
#30
dheiman
closed
6 years ago
0
Initialize with docker images
#29
dheiman
closed
6 years ago
1
RFE: have init support wider range of starting states (e.g. tarball, repo, Dockerfile)
#28
noblem
opened
6 years ago
0
Refactored for py3
#27
dheiman
closed
6 years ago
2
first time hydrant run, auto-create ~/.fissconfig
#26
noblem
opened
6 years ago
0
Multiple bugfixes and enhancements
#25
dheiman
closed
6 years ago
0
RFE: tests are needed
#24
noblem
opened
6 years ago
0
WDL template fragile/broken by default?
#23
noblem
closed
6 years ago
1
stumbling block(s) with local hydrant.cfg
#22
noblem
closed
6 years ago
2
default JSON generated by validate is, oops, invalid
#21
noblem
closed
6 years ago
2
test command should validate JSON prior to executing cromwell
#20
noblem
closed
6 years ago
2
log files created during test command
#19
noblem
opened
6 years ago
0
validate clobbers existing tests/input.json
#18
noblem
closed
6 years ago
1
RFE: more brief task names (and clever docker naming)
#17
noblem
opened
6 years ago
0
validate feedback
#16
noblem
closed
6 years ago
2
Command-Line task configs for init:
#15
dheiman
closed
6 years ago
0
Generality1
#14
noblem
closed
6 years ago
1
Fixes for issue 12
#13
noblem
closed
6 years ago
0
docker build: stumbling blocks
#12
noblem
opened
6 years ago
3
fatal showstopper bug: validate seems broken
#11
noblem
closed
6 years ago
1
WDL template needs more hand-holding
#10
noblem
opened
6 years ago
0
init command could give more usable default task names
#9
noblem
closed
6 years ago
1
~/.hydrant/config file would be valuable to have ASAP
#8
noblem
closed
6 years ago
1
hydrant build command needs to warn when Docker is not running
#7
noblem
closed
6 years ago
3
Indicating to user "what to do" at each step would be VERY helpful
#6
noblem
closed
6 years ago
2
n=1 tasks should be assumed, unless told otherwise
#5
noblem
closed
6 years ago
1
Packaging should not be added by default to WDL
#4
noblem
closed
6 years ago
2
are --task or --workflow arguments needed?
#3
noblem
closed
6 years ago
2
TTY settings to make progress bar work better?
#2
noblem
opened
6 years ago
0
Change some WARNINGs to INFO
#1
noblem
closed
6 years ago
1