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broadinstitute
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poolq
The Genetic Perturbation Platform's tool for deconvoluting and quantifying the results of pooled screens
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minor doc clarification w.r.t prefix max pos
#37
tmgreen
closed
1 month ago
0
Updates
#36
mtomko
closed
7 months ago
0
Fix version regex in makefile
#35
mtomko
closed
9 months ago
0
Port to Scala 3 (with newly released `scalafmt`)
#34
mtomko
closed
9 months ago
0
Condition report
#33
mtomko
closed
9 months ago
0
Smarter unexpected sequence report
#32
mtomko
closed
9 months ago
0
Condition barcode count summary report
#31
mtomko
closed
9 months ago
0
Use sampling for unexpected sequence reports
#30
mtomko
closed
9 months ago
0
Update actions
#29
mtomko
closed
10 months ago
0
Scala 3
#28
mtomko
closed
9 months ago
4
Use scala-csv
#27
mtomko
closed
10 months ago
0
Parse barcodes from read IDs in demultiplexed mode
#26
mtomko
closed
1 year ago
0
Rational args
#25
mtomko
closed
1 year ago
0
Support demultiplexed FASTQ files
#24
mtomko
closed
1 year ago
1
Demultiplexed FASTQ support
#23
mtomko
closed
1 year ago
3
Updates
#22
mtomko
closed
1 year ago
0
Error: One sample with pair-end reads as an input
#21
cissizhang
closed
1 year ago
2
Update CHANGELOG.md
#20
mtomko
closed
1 year ago
0
Document case for demultiplexed data
#19
mtomko
closed
1 year ago
0
Check FASTQ fields 1 and 3
#18
mtomko
closed
1 year ago
1
Document `--read-id-check-policy`
#17
mtomko
closed
1 year ago
0
Set version to 3.6.2-SNAPSHOT
#16
mtomko
closed
1 year ago
0
Add JMH benchmark module
#15
mtomko
opened
1 year ago
0
Update changelog
#14
mtomko
closed
1 year ago
0
Split barcode policy optimization
#13
mtomko
closed
1 year ago
1
Update sbt-tpolecat and fix associated compilation warnings
#12
mtomko
closed
1 year ago
1
Support reading zstd FASTQ files
#11
mtomko
opened
1 year ago
0
Plans to add poolq to bioconda
#10
LaurenceKuhl
opened
1 year ago
1
Replace sbt-github-packages with call to maven
#9
mtomko
opened
1 year ago
5
Support multiple inputs
#8
mtomko
closed
1 year ago
0
Dependency updates
#7
mtomko
closed
1 year ago
0
Rewrite with cats-effect, fs2
#6
mtomko
opened
1 year ago
0
Port to Scala 3
#5
mtomko
closed
9 months ago
0
Update versioning scheme
#4
mtomko
opened
1 year ago
1
Replace scopt with decline
#3
mtomko
opened
1 year ago
0
Add details about paired-end sequencing
#2
mtomko
closed
2 years ago
0
Update README
#1
mtomko
closed
2 years ago
0