issues
search
broadinstitute
/
ukbb_qc
QCing the UKBB
1
stars
0
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
UKB QC of 470K WES
#228
dianacornejo
opened
1 year ago
1
Added code to fix 455k frequencies
#227
ch-kr
opened
2 years ago
0
Add build configuration
#226
nawatts
closed
2 years ago
1
Freeze 7
#225
ch-kr
opened
3 years ago
0
Data dictionaries
#224
ch-kr
closed
3 years ago
2
Freeze 6
#223
ch-kr
closed
3 years ago
1
Small update to bam check script
#222
ch-kr
closed
3 years ago
0
Bam check
#221
ch-kr
closed
3 years ago
1
Haplotypecaller
#220
ch-kr
closed
3 years ago
0
Fixed issues found at runtime
#219
ch-kr
closed
3 years ago
0
Freeze 6
#218
ch-kr
closed
3 years ago
2
Haplotypecaller
#217
ch-kr
closed
3 years ago
0
Haplotypecaller
#216
ch-kr
closed
3 years ago
1
Fix
#215
ch-kr
closed
3 years ago
1
Added code to generate step 4 tsv
#214
ch-kr
closed
3 years ago
0
Tsv update
#213
ch-kr
closed
3 years ago
1
Release HT update
#212
ch-kr
closed
3 years ago
4
Release patch updates
#211
ch-kr
closed
3 years ago
1
Homalt
#210
ch-kr
closed
3 years ago
2
Homalt
#209
ch-kr
closed
3 years ago
0
Readviz step 3
#208
ch-kr
closed
3 years ago
0
Homalt
#207
ch-kr
closed
3 years ago
0
Fixed subpops check
#206
ch-kr
closed
3 years ago
0
Homalt
#205
ch-kr
closed
3 years ago
1
Added pop pca
#204
ch-kr
closed
3 years ago
0
Step 1 readviz fixes
#203
ch-kr
closed
3 years ago
0
Readviz
#202
ch-kr
closed
3 years ago
1
gnomAD readviz
#201
ch-kr
closed
3 years ago
0
Readviz fixes
#200
ch-kr
closed
3 years ago
0
Readviz
#199
ch-kr
closed
3 years ago
2
Added code to generate md5 for tabix indices
#198
ch-kr
closed
3 years ago
0
VCF export fixes
#197
ch-kr
closed
3 years ago
1
Fixed imports, added fix for TRUTH_SAMPLES dict (was initializing hail)
#196
ch-kr
closed
3 years ago
0
VCF MT + sanity checks
#195
ch-kr
closed
3 years ago
2
Utils
#194
ch-kr
closed
3 years ago
0
Added extra arg to separate vcf annotation reformatting and vcf mt ge…
#193
ch-kr
closed
3 years ago
0
Reorganized vcf mt code to reformat all annotations on release HT, no…
#192
ch-kr
closed
3 years ago
0
Runtime fixes for vcf MT
#191
ch-kr
closed
3 years ago
0
Added n_alt_alleles histogram to sanity checks
#190
ch-kr
closed
3 years ago
0
Updated vcf release to reflect new freq format
#189
ch-kr
closed
3 years ago
2
Frequency fixes
#188
ch-kr
closed
3 years ago
0
Added qual annotation (from QUALapprox)
#187
ch-kr
closed
3 years ago
0
Removed AS_BaseQRankSum from internal release
#186
ch-kr
closed
3 years ago
0
Added hotfix to vcf release
#185
ch-kr
closed
3 years ago
0
Frequency pan-ancestry updates
#184
ch-kr
closed
3 years ago
0
Added updates to importing pan-ancestry ht
#183
ch-kr
closed
3 years ago
0
Added load location HT to basics, load_data, load data utils
#182
ch-kr
closed
3 years ago
0
Added resources necessary for doubletons script
#181
ch-kr
closed
3 years ago
0
Fixed typo (added missing 'meta')
#180
ch-kr
closed
3 years ago
0
Add adj to calculate_concordance.py
#179
jkgoodrich
closed
3 years ago
0
Next