bystrogenomics bystro issues

bystrogenomics / bystro

High Dimensional Machine Learning Toolkit with applications in Genetics & Proteomics

Apache License 2.0

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issues

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Parent of Origin Verify Data Match Model Assumptions

#584 austinTalbot7241993 opened 3 days ago
1
Sprint 18

#583 cristinaetrv opened 3 days ago
0
Feature/better bystro build

#582 akotlar opened 4 days ago
1
[perl] add ANNOTATION.md

#581 akotlar opened 4 days ago
1
Bayesian Batch Effect Adaptation

#580 austinTalbot7241993 closed 2 days ago
1
reduce perl docker image size

#579 akotlar closed 19 hours ago
1
fix pyro imports by moving to pyro-ppl 1.9.1; fix rust warnings

#578 akotlar closed 5 days ago
1
Extra checks, allow for alternative allle to be reference

#577 austinTalbot7241993 closed 6 days ago
1
Feature/batch adaptation bayesian

#576 austinTalbot7241993 closed 6 days ago
2
Update .gitattributes to exclude .ipynb from programming language calculations

#575 akotlar closed 1 week ago
1
release 2.0.0-beta18

#574 akotlar closed 1 week ago
1
Cleanup documentation

#573 akotlar opened 1 week ago
0
Adding more informative errors in POE

#572 austinTalbot7241993 closed 1 week ago
1
Improve annotator installation scripts

#571 akotlar closed 1 week ago
11
Naive Multivariate Batch Adaptation

#570 austinTalbot7241993 opened 2 weeks ago
1
Batch Domain Adaptation

#569 austinTalbot7241993 closed 2 weeks ago
1
Fair PCA Demo

#568 austinTalbot7241993 closed 2 weeks ago
1
WIP Add rmt covariance estimation and tests

#567 IlhaH opened 1 month ago
1
Update hg38 to v11 and add support for gnomad.joint track in PRS

#566 akotlar closed 1 month ago
1
[prs] Distance-based PRS with corrected betas

#565 akotlar closed 1 month ago
1
POE demo

#564 austinTalbot7241993 closed 1 month ago
1
Added demonstration for network discovery

#563 austinTalbot7241993 closed 1 month ago
2
Imputation initial demo

#562 austinTalbot7241993 closed 2 weeks ago
2
Release/2.0.0 beta16

#561 akotlar closed 1 month ago
1
[installation] Pin OSQP version to ensure platform compatibility

#560 akotlar closed 1 month ago
2
Fixed various issues

#559 austinTalbot7241993 closed 1 month ago
1
Fixed permutation + BCA

#558 austinTalbot7241993 closed 1 month ago
1
Update MultipleSNP2 and add docstring for demo

#557 IlhaH closed 1 month ago
1
Update MultiSNP for demo

#556 IlhaH closed 1 month ago
1
Sprint 17

#555 cristinaetrv opened 1 month ago
1
Sprint 16

#554 cristinaetrv opened 1 month ago
0
Add covariance tests from HDTest into hypothesis_hd with correspondin…

#553 IlhaH closed 1 month ago
1
Added BCA confidence intervals

#552 austinTalbot7241993 closed 2 months ago
1
[api] Show progress bar during file stream or download

#551 akotlar closed 2 months ago
1
Feature/sprint 14 somascan dataset join

#550 akotlar closed 2 months ago
1
Sprint 15 Task List

#549 cristinaetrv opened 2 months ago
0
Bump setuptools from 65.5.1 to 70.0.0 in /python

#548 dependabot[bot] closed 2 months ago
0
Add modified Multi-snp and Docstring

#547 IlhaH closed 2 months ago
1
Add converted high dimensional covariance testing

#546 IlhaH closed 2 months ago
3
[scheduler] Even more resilient perl beanstalkd annotation worker

#545 akotlar closed 2 months ago
1
[scheduler, annotation, saveFromQuery, beanstalkd] Auto-reconnecting perl event client, report total sites processed in completion messages

#544 akotlar closed 2 months ago
0
Parent of Origin- Multi-snp and Reorg

#543 austinTalbot7241993 closed 2 months ago
0
Add option to use two sample tests from hypothesis_classical for p value

#542 IlhaH closed 3 months ago
0
Fix bugs in hypothesis testing

#541 austinTalbot7241993 closed 3 months ago
1
Add pyRiemann test.py and unit tests

#540 IlhaH closed 3 months ago
1
Update LD clumping to take loci with best p-value per bin.

#539 cristinaetrv closed 2 months ago
1
Classical Hypothesis Testing

#538 austinTalbot7241993 closed 3 months ago
0
[scheduler] Periodically touch beanstalkd python jobs

#537 akotlar closed 2 months ago
0
Sprint 14 Task List

#536 cristinaetrv opened 3 months ago
2
[PRS] Add progress reporting

#535 akotlar closed 3 months ago
0