califano-lab PISCES issues

califano-lab / PISCES

R package for Protein activity analysis of single-cell RNAseq.

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issues

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what is HasPISCESAssay ?

#22 BioYork opened 7 months ago
0
CorDist function issue

#21 vleifer685 opened 1 year ago
0
LouvainKRange run error

#20 chapmanchao opened 1 year ago
0
meta_narnea/PISCESActivity: prep...Error: $ operator is invalid for atomic vectors

#19 stanaka6 opened 1 year ago
1
MWUMrs find master regulators on original clusters

#18 Roger-GOAT opened 1 year ago
0
Version of PISCES used for the article Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages

#17 ERIGR opened 1 year ago
0
Why aren't these two functions (CorDist, LouvainKRange) in the latest package?

#16 baoyulinn opened 1 year ago
8
Return full ARACNe ranking

#15 jonathan-f opened 2 years ago
0
Where can I found the ‘d496-blood/d496-blood_pisces-narnea.rds' filles

#14 GuohuaZhu opened 2 years ago
1
CorDist function missing

#13 oyxf closed 2 years ago
3
vignette completion

#12 neurocycology opened 2 years ago
0
Advice on creating metaCells

#11 jdarmitage opened 2 years ago
0
CorDist taking forever

#10 nazhar opened 2 years ago
0
Create metacell_funcs.R

#9 Ann-Holmes opened 2 years ago
0
Usage with small number of cells

#8 tjbencomo opened 3 years ago
0
How to extract target genes from each regulon

#7 jdarmitage opened 3 years ago
4
Stuck after the message "Computing regulons enrichment with aREA"

#6 gorkemkose opened 3 years ago
2
Obtaining network file

#5 gorkemkose closed 3 years ago
0
Codes for generating ARANE network

#4 LikaiTan opened 3 years ago
1
No vignettes found

#3 jojob123 opened 3 years ago
1
object 'num.dims' not found

#2 yinshanfang opened 3 years ago
5
Usage with integrated data?

#1 hummuscience opened 4 years ago
0