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cellannotation
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cell-annotation-schema
General, open-standard schema for cell annotations
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Unit tests working with test_data only
#35
hkir-dev
closed
11 months ago
1
Tests for merged schemas too strict
#34
dosumis
closed
11 months ago
1
schema validation badge shows fail when PR validation fails
#33
dosumis
closed
11 months ago
0
Support both positive and negative marker gene evidence
#32
dosumis
closed
8 months ago
1
Name tweaks
#31
dosumis
closed
11 months ago
20
Tweaking names
#30
dosumis
closed
11 months ago
0
Add support for recording annotation type
#29
dosumis
opened
11 months ago
4
Issue 27
#28
hkir-dev
closed
11 months ago
0
Add release mechanism
#27
dosumis
closed
11 months ago
1
Schema extension logic added
#26
hkir-dev
closed
11 months ago
7
Write SOP for & functional specifications for writing and converting spreadsheets to CAS
#25
dosumis
closed
3 months ago
4
Generate small anndata file for testing JSON --> Anndata scripts
#24
dosumis
closed
8 months ago
2
FIxes #22
#23
dosumis
closed
11 months ago
6
Move provenance into general metadata about cell sets
#22
dosumis
closed
11 months ago
1
Update README.md
#20
dosumis
closed
11 months ago
0
Added badge for schema validation checks
#19
ubyndr
closed
11 months ago
0
Add badge for schema validation checks to README.md
#18
dosumis
closed
11 months ago
0
MVP-4538 Add standard JSON schema validator
#17
ubyndr
closed
11 months ago
8
Bican annotation transfer take3
#16
dosumis
closed
11 months ago
2
Recovering bican edits
#15
dosumis
closed
11 months ago
0
Add Add GitHub action to run builds and tests on PRs
#14
dosumis
closed
11 months ago
0
Add scripts to build additional release artefact with BICAN compliant fields & test the resulting file.
#13
dosumis
closed
11 months ago
0
Add standard JSON schema validator with support for testing schema validity and test against examples (TBA).
#12
dosumis
closed
11 months ago
0
Bican annotation transfer
#11
dosumis
closed
1 year ago
0
Add build and testing systems
#10
dosumis
closed
11 months ago
0
Automated annotation object should have confidence score field
#9
dosumis
closed
3 months ago
3
BICAN use case - track multiple annotation transfers onto a single cell set
#8
dosumis
closed
11 months ago
5
BICAN - parent cell set
#7
dosumis
closed
1 year ago
6
support for annotations that break the assumption of one key:value pair per cell (BICAN)
#6
dosumis
opened
1 year ago
1
Add cell set accessions and parent cell set accession fields for BICAN
#5
dosumis
closed
11 months ago
0
BICAN specific fields
#4
dosumis
closed
3 months ago
0
Update general_schema.json
#3
dosumis
closed
1 year ago
2
Add option to add metadata about cell annotation keys (AKA cellannotation_sets)
#2
dosumis
closed
11 months ago
2
Suggested name change on cellannotation_set
#1
dosumis
closed
1 year ago
6
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