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clingen-data-model
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genegraph
Presents an RDF triplestore of gene information using GraphQL APIs
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[GC Express]:
#788
Sheng-An
closed
2 months ago
1
Added allowances for assertion_ prefix in GV iris
#787
tnavatar
closed
3 months ago
0
[GC Express]: GC Express Removal
#786
Sheng-An
closed
6 months ago
1
Adding sop 10
#785
tnavatar
closed
8 months ago
0
Dive into the Genegraph 2.0 framework
#784
toneillbroad
closed
1 month ago
0
[GC Express]:
#783
Sheng-An
closed
8 months ago
1
[GC Express]:
#782
Sheng-An
closed
9 months ago
1
[GC Express]:
#781
marinadistefano
closed
11 months ago
1
[GC Express]:
#780
courtneythaxton
closed
11 months ago
2
Setup mini-epic for creating baseline clinvar var to vrs 2.0 pipeline
#779
larrybabb
closed
12 months ago
0
Establish a baseline Variation to VRS (allele, CN or Text) output
#778
larrybabb
closed
10 months ago
3
ClinVar GK Pilot v2 alpha Snapshot & Documentation
#777
larrybabb
closed
8 months ago
0
RocksDB memory still grows vastly beyond JVM and configured rocksdb buffer limits
#776
theferrit32
closed
4 months ago
1
Enable clinvar messages to be ingested from kafka out of order
#775
theferrit32
opened
1 year ago
0
gene validity versioning trial
#774
tnavatar
closed
11 months ago
0
Evaluation of VRS allele generation in Clojure
#773
tnavatar
closed
1 year ago
0
Write up proposal for new VRS digest scheme
#772
tnavatar
closed
4 months ago
0
Fixing text/null variants that should have been otherwise
#771
theferrit32
closed
4 months ago
1
Merge main-repl functionality into main
#770
theferrit32
closed
4 months ago
1
Including submitter name and disease name in transformed outputs
#769
theferrit32
closed
1 year ago
0
vrs rocksdb snapshotting
#768
theferrit32
closed
1 year ago
1
Generate auto-versioning report for Gene Validity curations
#767
tnavatar
closed
11 months ago
2
Expire contribution values appropriately
#766
tnavatar
closed
1 year ago
0
Adapt gene validity transform to new framework
#765
tnavatar
closed
1 month ago
0
Adapt genegraph.database to new framework
#764
tnavatar
closed
1 year ago
0
Investigate RocksDB memory usage
#763
theferrit32
closed
1 year ago
6
Handle 'conflicting data from submitters' clinsig value in clinical assertions
#762
theferrit32
opened
1 year ago
0
VRS 2.0 Schema Modifications for VariationDescriptors
#761
toneillbroad
closed
10 months ago
2
Swap to hato http client for rocksdb http registry
#760
theferrit32
closed
1 year ago
3
Integrate rocksdb snapshot generation into snapshot startup mode
#759
theferrit32
closed
1 year ago
2
Genegraph 2.0 Framework Development
#758
tnavatar
opened
1 year ago
0
Variation descriptor snapshot generation producing text variation instead of Allele
#757
toneillbroad
closed
1 year ago
5
Handle delete events for variation
#756
theferrit32
closed
1 year ago
0
Implement Absolute/Relative copy number CanonicalVariation wrapper
#754
theferrit32
closed
1 year ago
5
Mark records in delete events as deleted and remove in the snapshot queries
#753
theferrit32
closed
1 year ago
0
Implement copy number variation normalization
#752
theferrit32
closed
1 year ago
1
[GC Express]: FTSJ1
#751
icordovaG
closed
1 year ago
1
Issue with link generated from GCI to Website
#750
tnavatar
closed
1 year ago
5
Monitor beginning of month deployments to Clinvar FTP Site
#749
toneillbroad
closed
1 year ago
0
Some variation descriptors do not have a variant
#748
theferrit32
opened
1 year ago
2
Rocksdb vrs caching
#747
theferrit32
closed
1 year ago
0
Create an interceptor that writes snapshot data to rocks db for faster snapshot generation
#746
toneillbroad
closed
1 year ago
0
Connect vrs-cache application to in-cluster variation normalizer and evaluate performance
#745
theferrit32
closed
1 year ago
1
[GC Express]:
#744
Sheng-An
closed
1 year ago
0
GCI addition of scoreStatus enum values and scoreExplanation to case-…
#743
toneillbroad
closed
1 year ago
0
Moved paternity-maternity-confirmed field to evidence item level
#742
toneillbroad
closed
1 year ago
0
Genegraph 2.0 Architecture Design
#741
tnavatar
closed
1 year ago
0
Genegraph should recover from no-internet connectivity at startup
#740
tnavatar
closed
11 months ago
2
Produce lazy seqs for Jena query results
#739
tnavatar
opened
1 year ago
0
Tristan/queries return lazy seq
#738
tnavatar
closed
1 year ago
0
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