issues
search
datajoint
/
element-interface
Common functions for the DataJoint Elements
https://datajoint.com/docs
MIT License
3
stars
16
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Add `memoized_result` + update calcium imaging utility functions
#121
kushalbakshi
closed
1 month ago
0
Update docs, GHA, version, CHANGELOG
#120
kushalbakshi
closed
1 month ago
1
feat(run_caiman): use `output_dir` for `CAIMAN_TEMP`
#119
ttngu207
closed
1 month ago
0
fix: incorrect dimension ordering for single-plane caimain loading
#118
ttngu207
closed
1 month ago
0
feat: set `gb_per_file` and write multiple bigtiff
#117
ttngu207
closed
1 month ago
0
feat: add `use_cuda` for caiman
#116
ttngu207
closed
2 months ago
0
fix: additional safeguard to close the file and delete the tffl object
#115
ttngu207
closed
2 months ago
0
update: deprecate "caiman_compatible" argument
#114
ttngu207
closed
2 months ago
0
Update CaImAn utilities for compatibility with latest CaImAn
#113
kushalbakshi
closed
3 months ago
0
Update multiprocessing arguments to latest versions
#112
kushalbakshi
closed
3 months ago
0
Dev memoized results
#111
ttngu207
closed
3 months ago
1
Fix(suite2p_loader): Return nan array if "VCorr" not in suite2p output
#110
kushalbakshi
closed
3 months ago
0
Primarily fixing suite2p loader for missing ROI detection or trace extraction - pulling from staging for other minor updates
#109
ttngu207
closed
3 months ago
0
feat: handle PrairieView new multi-page tif format
#108
ttngu207
closed
3 months ago
0
Check for bruker-generated multi_tiff
#107
kushalbakshi
closed
3 months ago
0
Add codespell: workflow + config and have it fix some typos
#106
yarikoptic
opened
6 months ago
0
Add `Exception` to `raise` statements
#105
kushalbakshi
closed
6 months ago
0
Catch expection for caiman compatible files in prairie_view_loader
#104
kushalbakshi
closed
6 months ago
0
Add meaningful exception error in `write_single_bigtiff()`
#103
kushalbakshi
closed
6 months ago
0
Dev memoized results
#102
ttngu207
closed
7 months ago
0
Bugfix - remove hardcoded `n_fields` from `prairie_view_loader.py`
#101
kushalbakshi
closed
7 months ago
0
fix handling of num_frames and plane search for single/multi plane dataset
#100
ttngu207
closed
7 months ago
0
Add multi-plane caiman image processing
#99
kushalbakshi
closed
7 months ago
0
fix(prairie_view_loader): fix file search for single-plane dataset
#98
ttngu207
closed
7 months ago
0
Fix file name extraction from PrairieView metadata
#97
kushalbakshi
closed
7 months ago
1
Add multi-plane capability to caiman utilities
#96
kushalbakshi
closed
9 months ago
0
revert: :memo: revert docs dark mode cell text color
#95
A-Baji
closed
9 months ago
0
Set `indices=None` in `fit_file()` + comments for clarity
#94
kushalbakshi
closed
10 months ago
0
Fixes to run caiman and ingest data
#93
kushalbakshi
closed
10 months ago
0
Update params -> parameters
#92
kushalbakshi
closed
11 months ago
0
Fix typo indicies -> indices
#91
kushalbakshi
closed
11 months ago
0
passing `indices` as argument to `fit_file`
#90
ttngu207
closed
11 months ago
0
Check for z_fields in 2nd cycle `.xml` file
#89
kushalbakshi
closed
1 year ago
0
Multi plane caiman
#88
ttngu207
closed
1 year ago
0
Bugfix, improvements to DANDI upload functionality
#87
ttngu207
closed
1 year ago
1
Refinements to Prairie View metadata loader
#86
kushalbakshi
closed
1 year ago
1
Fix typo in changelog
#85
kabilar
closed
1 year ago
0
Fix docs
#84
kabilar
closed
1 year ago
1
Fix DANDI Upload URL
#83
kushalbakshi
closed
1 year ago
1
Fix dark mode and CI/CD issues
#82
kushalbakshi
closed
1 year ago
0
Fix docs tutorials in dark mode
#81
kushalbakshi
closed
1 year ago
0
Tutorial notebook renders incorrectly in dark mode
#80
kushalbakshi
closed
9 months ago
1
Clean up variable names in `prairieviewreader.py`
#79
kushalbakshi
closed
1 year ago
1
Fix multiple z device ingestion in `prairieviewreader.py`
#78
kushalbakshi
closed
1 year ago
0
Multiple z devices (PrairieView metadata reader)
#77
juremaj
closed
1 year ago
6
Add Intan loader
#76
tdincer
opened
1 year ago
5
refactor: :art: streamline the code
#75
JaerongA
closed
1 year ago
6
Formatting
#74
CBroz1
closed
1 year ago
2
Intan loader
#73
tdincer
closed
1 year ago
6
Update setup.py
#72
tdincer
closed
1 year ago
0
Next