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dcjones
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quip
Compressing next-generation sequencing data with extreme prejudice.
http://www.cs.washington.edu/homes/dcjones/quip/
BSD 3-Clause "New" or "Revised" License
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Fix mate sequence when reading sam/bam
#31
jbedo
opened
2 years ago
0
Facing difficulties decompressing bam file
#30
sagnikbanerjee15
opened
3 years ago
0
<< Using with LAMMPS >>
#29
icamps
opened
5 years ago
4
Now in homebrew
#28
tseemann
opened
5 years ago
0
Error when building with autoreconf
#27
aaiezza
opened
8 years ago
0
Quip SAM parser crashes on some samples
#26
inumanag
opened
8 years ago
0
Base "M" in the reference genome failed quip
#25
lh3
closed
9 years ago
2
Quip core dump
#24
jkbonfield
closed
9 years ago
4
option -l
#23
iochoa
opened
10 years ago
2
feature request: support for colorspace sequence?
#22
biocyberman
opened
10 years ago
5
To SAM/BAM format, Segmentation fault !!!
#21
brunoli
closed
11 years ago
5
Filename seems to cause errors.
#20
averaart
closed
11 years ago
2
Buffer Overflow. Easy fix.
#19
simnim
closed
11 years ago
1
segmentation fault in the memory allocator:
#18
sandoro
opened
11 years ago
0
Compilation and linking problems
#17
ghuls
closed
11 years ago
1
quip compresson of SAM file
#16
sandoro
closed
11 years ago
2
Problem_in_quip_file_decompression
#15
StefanoCast
closed
11 years ago
6
Output to temp file during compression, then rename after
#14
DarwinAwardWinner
closed
11 years ago
2
Handle compressed fastq files as input
#13
DarwinAwardWinner
closed
11 years ago
2
File compresses with -a fails for a particular fastq file
#12
vedarethinar
closed
11 years ago
8
Inefficiency when compressing reads of variable length.
#11
dcjones
opened
11 years ago
0
Fails on a given SAM read
#10
westerman
closed
12 years ago
1
'*' in quality strings
#9
jkbonfield
closed
12 years ago
4
Keep reference file
#8
westerman
opened
12 years ago
2
Can not compile -- RedHat
#7
westerman
closed
12 years ago
5
advice for running quip on exome BAM
#6
akiezun
closed
12 years ago
1
quip test quiped BAM file fails.
#5
ghuls
closed
12 years ago
1
Parallel Compression/Decompression
#4
dcjones
opened
12 years ago
0
segfault when creating a qp file when/after "assembling contigs ... done. (0 contigs, 0nt)"
#3
ghuls
closed
12 years ago
0
segfault when testing qp file.
#2
ghuls
closed
12 years ago
7
Problems compiling quip
#1
ghuls
closed
12 years ago
4