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dieterich-lab
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FUCHS
FUCHS - FUll circle CHaracterization from rna-Seq
GNU General Public License v3.0
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FUCHS 0.3.0 branch seems not to contain commit #afe7192
#25
HaraldWilhelmi
closed
1 year ago
3
sys.meta_path is None
#24
jaanckae
opened
1 year ago
3
Question: BED annotation input
#23
mumichae
opened
2 years ago
0
Logic error? The program will miss one read for each junction
#22
Christina-hshi
opened
3 years ago
1
Fuchs 0.3
#21
tjakobi
closed
4 years ago
0
Negative length exons & systematic coordinate errors
#20
tgermade
opened
4 years ago
2
where to find the bed6 annotation file
#19
sambhav2mishra
opened
5 years ago
0
Cannot not find numpy when installing
#18
Rainkikiki
closed
4 years ago
3
Merging parallel branch with master
#17
tjakobi
closed
6 years ago
0
skip.exon.bed file empty
#16
CYZbasebio
opened
7 years ago
0
strand in "sample.exon_counts.bed" file
#15
qindan2008
opened
7 years ago
0
how FUCHS circ handle multiple samples at the same time?
#14
qindan2008
closed
7 years ago
1
"refseq" and "ensembl" Annotation.bed file format
#13
qindan2008
closed
7 years ago
1
some issues with FUCHS
#12
CYZbasebio
opened
7 years ago
2
guided_denovo_circle_structure_parallel - wrong path
#11
CDieterich
closed
7 years ago
2
graphical representation is wrong
#10
FranziMe
closed
7 years ago
0
bug in mate_status.txt output
#9
CDieterich
closed
7 years ago
2
Optional FUCHS modules are not discussed
#8
CDieterich
closed
4 years ago
0
guided_denovo vs denovo script
#7
CDieterich
closed
7 years ago
6
Check for R dependency before program start
#6
CDieterich
closed
4 years ago
2
Relative path handling
#5
CDieterich
closed
7 years ago
0
Directories are not created and program exits
#4
CDieterich
closed
7 years ago
1
summarized_coverage_profiles.R should make sure all dependencies are installed
#3
tjakobi
closed
7 years ago
1
FUCHS is not compatible with bedtools > 2.24.0
#2
tjakobi
closed
7 years ago
0
Problem with BED12 files in IGV
#1
CDieterich
closed
7 years ago
0