dnaase Bis-tools issues

dnaase / Bis-tools

A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clustering: alignWigToBed; )

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issues

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Bis-SNP fails to detect 'CpG' on opposite strand for C with CR context

#10 iromeo opened 3 years ago
1
Too much reads were filtered by BisulfiteIncompleteConvReadsFilter

#9 YaliBai opened 4 years ago
0
-nt parameter error

#8 ryomawave opened 4 years ago
0
the --stand_call_conf and --stand_emit_conf parameter's difference

#7 ryomawave opened 4 years ago
0
Update manual of Bis-SNP

#6 sorjuela opened 5 years ago
0
Problem when running BisulfiteGenotyper

#5 LiyanJi-code opened 5 years ago
1
Associate reads with called SNPs

#4 zji90 opened 5 years ago
0
Malformed VCF output in snp.raw.vcf files

#3 wac opened 5 years ago
1
big error ！！！！

#2 feihongloveworld opened 6 years ago
0
Can't find BisulfiteCountVariant Walker

#1 massfl opened 6 years ago
13