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dsarov
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ARDaP
Comprehensive resistance detection from WGS data
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Fastree2 appears to not create phylogeny in latest version
#37
dsarov
opened
4 months ago
1
Fix renaming in trimmomatic step
#36
dsarov
opened
4 months ago
0
Unable install ARDaP
#35
Dx-wmc
closed
5 months ago
10
V2.3_beta
#34
dsarov
closed
6 months ago
0
Ardap doesn't report correctly
#33
Koen-vdl
closed
6 months ago
14
ReferenceAlignment error
#32
Rutaiwan
closed
7 months ago
10
feature request: fast test data (config file)
#31
chrisgulvik
opened
1 year ago
1
Add processing of single end reads
#30
dsarov
opened
2 years ago
0
Resfinder intervals
#29
dsarov
closed
2 years ago
0
Resfinder intervals
#28
dsarov
closed
2 years ago
1
Add gatk cluster parameters
#27
thomcuddihy
closed
3 years ago
1
Reduce no of job requests
#26
dsarov
opened
3 years ago
0
Annotated vcfs are also output into the VCFs output folder
#25
dsarov
opened
3 years ago
0
Assemblies misbehaving when period/full stop included in file name
#24
dsarov
opened
3 years ago
0
GWAS generation script
#23
dsarov
opened
3 years ago
0
Assemblies won't run by themselves
#22
dsarov
opened
3 years ago
0
GWAS ouput needs refining
#21
dsarov
opened
3 years ago
0
fdasfierfasf
#20
erin-price
closed
4 years ago
0
werawefgsdfad
#19
erin-price
closed
4 years ago
1
Lalalala
#18
erin-price
closed
4 years ago
1
Update README.md
#17
erin-price
closed
4 years ago
0
Update README.md
#16
erin-price
closed
4 years ago
0
Allow user to just specify species rather than both database and ref
#15
dsarov
closed
4 years ago
1
Art addition
#14
dsarov
closed
4 years ago
0
demadden database construction images
#13
demadden
closed
4 years ago
0
Something wrong with Trimmomatic
#12
vlgShpak
closed
4 years ago
1
Dedup error
#11
jasonsahl
closed
4 years ago
3
Conda does not activate in submitted processes
#10
esteinig
closed
4 years ago
2
Ardap v1.5
#9
dsarov
closed
5 years ago
0
Potential dependency issue with the ape package in R
#8
dsarov
closed
4 years ago
2
Losing processing of multiple samples following downsampling process
#7
dsarov
closed
5 years ago
13
Drop _sequence input glob
#6
esteinig
closed
5 years ago
2
Conda packaging
#5
esteinig
opened
5 years ago
1
Cleanup directory structure
#4
esteinig
closed
5 years ago
3
SQL queries in Nextflow
#3
esteinig
closed
5 years ago
2
ARDaP reworks v1.5 for Nextflow
#2
dsarov
closed
5 years ago
0
Ardap_v1.4
#1
dsarov
closed
5 years ago
0