dynverse dynmethods issues

dynverse / dynmethods

A collection of 50+ trajectory inference methods within a common interface 📥📤

https://dynverse.org

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issues

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NULL model slots after running infer_trajectories

#175 shaln closed 3 months ago
1
Method request: WOT

#174 erzakiev opened 6 months ago
0
fix invalid branch #172

#173 szcf-weiya closed 7 months ago
1
no SCORPIUS@dynwrap branch

#172 szcf-weiya closed 7 months ago
0
Suddenly, all Python based wrapped methods are down! Tested on both Ubuntu and Windows.

#171 noobCoding opened 10 months ago
0
arm64 images support?

#170 erzakiev opened 1 year ago
1
How to modify UMAP parameters inside PAGA function ?

#169 Bio-data-tricks closed 2 years ago
0
PAGA_Tree: 'int' object has no attribute 'encode'

#168 KforKuma opened 2 years ago
1
infer_trajectory() does not produce any output

#167 lemdcock opened 2 years ago
0
Is monocle3 supported?

#166 alexQiSong opened 3 years ago
0
Issue with Singularity on HPC Cluster

#165 msubramanian10 closed 3 years ago
1
Package ‘dynmethods’ is not available (for R version 4.0.0)

#164 ChonkyPotato opened 4 years ago
1
Wanderlust: NameError: name 'np' is not defined

#163 MaxKman opened 4 years ago
0
Slingshot method does not detect groups_id and dimred prior information

#162 jma1991 opened 4 years ago
2
Slingshot native results vs dyn

#161 royfrancis opened 4 years ago
2
Feature request: Allow Slingshot method to accept custom cluster labels and dimensionality reduction

#160 jma1991 opened 4 years ago
0
1.0.5

#159 zouter closed 5 years ago
1
Devel2master

#158 zouter closed 5 years ago
0
update for new paga and monocle versions

#157 rcannood closed 5 years ago
1
Docker installation

#156 DHGK opened 5 years ago
9
Oscope

#155 ramiromagno opened 5 years ago
1
Implement workaround for h5 1.8.4 on windows; rebuild all containers

#154 rcannood closed 5 years ago
0
Implement workaround for h5 1.8.4 on windows; rebuild all containers

#153 rcannood closed 5 years ago
2
Wrap some methods directly in R

#152 zouter opened 5 years ago
6
dynmethods 1.0.0

#151 zouter closed 5 years ago
0
Dynwrapv2

#150 rcannood closed 5 years ago
0
Update all methods for the new dynwrap

#149 rcannood closed 5 years ago
66
Unavailable Singularity Containers

#148 KrisDavie closed 5 years ago
7
Question about parameters

#147 diegogarcia101 closed 5 years ago
3
update for dynwrap 0.3.0

#146 rcannood closed 5 years ago
1
Investigate insofar some methods could use cytometry data as input (with focus on cytof perhaps)

#145 zouter closed 5 years ago
1
update methods to remove feather output

#144 rcannood closed 5 years ago
1
update methods and readme

#143 rcannood closed 5 years ago
1
Devel

#142 rcannood closed 5 years ago
1
correct readme

#141 zouter closed 5 years ago
0
Update methods: MST, PAGA tree and GNG

#140 zouter closed 5 years ago
0
GraphDDP

#139 zouter opened 5 years ago
0
DDD

#138 zouter closed 5 years ago
0
CONFESS

#137 zouter opened 5 years ago
0
CSHMM

#136 zouter opened 5 years ago
0
Topographer

#135 zouter closed 5 years ago
0
B-RGPs

#134 zouter closed 5 years ago
0
Monocle 1

#133 zouter closed 5 years ago
0
WaveCrest

#132 zouter closed 5 years ago
0
UNCURL

#131 zouter closed 5 years ago
0
TreeTop

#130 zouter closed 5 years ago
0
TASIC

#129 zouter closed 5 years ago
0
STREAM

#128 zouter closed 5 years ago
0
SoptSC

#127 zouter closed 5 years ago
0
SOMSC

#126 zouter closed 5 years ago
0