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dynverse
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dynmethods
A collection of 50+ trajectory inference methods within a common interface 📥📤
https://dynverse.org
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NULL model slots after running infer_trajectories
#175
shaln
closed
4 months ago
1
Method request: WOT
#174
erzakiev
opened
8 months ago
0
fix invalid branch #172
#173
szcf-weiya
closed
8 months ago
1
no SCORPIUS@dynwrap branch
#172
szcf-weiya
closed
8 months ago
0
Suddenly, all Python based wrapped methods are down! Tested on both Ubuntu and Windows.
#171
noobCoding
opened
1 year ago
0
arm64 images support?
#170
erzakiev
opened
1 year ago
1
How to modify UMAP parameters inside PAGA function ?
#169
Bio-data-tricks
closed
2 years ago
0
PAGA_Tree: 'int' object has no attribute 'encode'
#168
KforKuma
opened
2 years ago
1
infer_trajectory() does not produce any output
#167
lemdcock
opened
3 years ago
0
Is monocle3 supported?
#166
alexQiSong
opened
3 years ago
0
Issue with Singularity on HPC Cluster
#165
msubramanian10
closed
3 years ago
1
Package ‘dynmethods’ is not available (for R version 4.0.0)
#164
ChonkyPotato
opened
4 years ago
1
Wanderlust: NameError: name 'np' is not defined
#163
MaxKman
opened
4 years ago
0
Slingshot method does not detect groups_id and dimred prior information
#162
jma1991
opened
4 years ago
2
Slingshot native results vs dyn
#161
royfrancis
opened
4 years ago
2
Feature request: Allow Slingshot method to accept custom cluster labels and dimensionality reduction
#160
jma1991
opened
5 years ago
0
1.0.5
#159
zouter
closed
5 years ago
1
Devel2master
#158
zouter
closed
5 years ago
0
update for new paga and monocle versions
#157
rcannood
closed
5 years ago
1
Docker installation
#156
DHGK
opened
5 years ago
9
Oscope
#155
ramiromagno
opened
5 years ago
1
Implement workaround for h5 1.8.4 on windows; rebuild all containers
#154
rcannood
closed
5 years ago
0
Implement workaround for h5 1.8.4 on windows; rebuild all containers
#153
rcannood
closed
5 years ago
2
Wrap some methods directly in R
#152
zouter
opened
5 years ago
6
dynmethods 1.0.0
#151
zouter
closed
5 years ago
0
Dynwrapv2
#150
rcannood
closed
5 years ago
0
Update all methods for the new dynwrap
#149
rcannood
closed
5 years ago
66
Unavailable Singularity Containers
#148
KrisDavie
closed
5 years ago
7
Question about parameters
#147
diegogarcia101
closed
5 years ago
3
update for dynwrap 0.3.0
#146
rcannood
closed
5 years ago
1
Investigate insofar some methods could use cytometry data as input (with focus on cytof perhaps)
#145
zouter
closed
5 years ago
1
update methods to remove feather output
#144
rcannood
closed
5 years ago
1
update methods and readme
#143
rcannood
closed
5 years ago
1
Devel
#142
rcannood
closed
5 years ago
1
correct readme
#141
zouter
closed
5 years ago
0
Update methods: MST, PAGA tree and GNG
#140
zouter
closed
5 years ago
0
GraphDDP
#139
zouter
opened
5 years ago
0
DDD
#138
zouter
closed
5 years ago
0
CONFESS
#137
zouter
opened
5 years ago
0
CSHMM
#136
zouter
opened
5 years ago
0
Topographer
#135
zouter
closed
5 years ago
0
B-RGPs
#134
zouter
closed
5 years ago
0
Monocle 1
#133
zouter
closed
5 years ago
0
WaveCrest
#132
zouter
closed
5 years ago
0
UNCURL
#131
zouter
closed
5 years ago
0
TreeTop
#130
zouter
closed
5 years ago
0
TASIC
#129
zouter
closed
5 years ago
0
STREAM
#128
zouter
closed
5 years ago
0
SoptSC
#127
zouter
closed
5 years ago
0
SOMSC
#126
zouter
closed
5 years ago
0
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