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enasequence
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enaBrowserTools
A collection of scripts to assist in the retrieval of data from the ENA Browser
Apache License 2.0
74
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configparser error?
#82
jjkoehorst
opened
6 months ago
2
DCP-4034: fix order based on portal api query
#81
lilim-ebi
closed
9 months ago
0
removed SCL
#80
suranjayathilaka
closed
1 year ago
0
425 error - EnaDataGet
#79
ANDdna1991
closed
1 year ago
1
enaDataGet - HTTP error 400
#78
Didoule
closed
1 year ago
1
Issues76: update snapshot change lister
#77
lilim-ebi
closed
1 year ago
0
enaGroupGet Portal API URLs return no results
#76
bricoletc
closed
1 year ago
2
Can't download in parallel
#75
Aduboahen
closed
1 year ago
5
RT662897: update version
#74
lilim-ebi
closed
1 year ago
0
RT662185: Issue with enaDataGet
#73
lilim-ebi
closed
1 year ago
0
DCP-3197 Submission loader to load submission ID and alias incrementally into etapro
#72
vishnu-ebi
closed
1 year ago
0
enaDataGet error with FTP transfer
#71
sagitaninta
closed
1 year ago
1
enaDataGet error
#70
Jigyasa3
closed
1 year ago
1
Issues:68- Added sample download flow
#69
Manishemblebi
closed
2 years ago
0
Accession not found even though it exists
#68
Jigyasa3
closed
2 years ago
3
accept optional query. downloadData.
#67
suranjayathilaka
closed
2 years ago
0
enaDataGet download giving HTTP Error 400 error
#66
awitney
opened
3 years ago
10
Error when downloading raw sequencing files from a registered project.
#65
padpadpadpad
closed
1 year ago
1
no ssl needs to be passed into the request, python will handle that automatically
#64
ialbert
closed
2 years ago
1
Snapshot change lister
#63
suranjayathilaka
closed
3 years ago
0
TimeoutError with whatever I want to download
#62
jjkoehorst
closed
1 year ago
1
Error with retrieving fastq files with enaGroupGet
#61
chazdm
closed
1 year ago
3
Update utils.py
#60
jjkoehorst
closed
3 years ago
0
HTTPError after enaGroupGet
#59
lvelosuarez
closed
1 year ago
2
Ability to only check if files are available for download
#58
SichongP
opened
3 years ago
0
ssl Internal Error
#57
bricoletc
closed
1 year ago
1
No redownload of truncated files
#56
jdm204
opened
3 years ago
0
Error in using enaBrowserTools to download SRR
#55
dzy-3737
opened
4 years ago
0
Improve error reporting and fix wgs accession bugs
#54
josieburgin
closed
3 years ago
2
Genome download which files to use
#53
jjkoehorst
opened
4 years ago
0
allowing more digits for SRA numbers
#52
rpolicastro
closed
4 years ago
3
Remove Python 2 scripts and bug fixes
#51
josieburgin
closed
4 years ago
0
URL sanitizing breaks Aspera downloads
#50
pbradz
closed
4 years ago
2
Errors accessing fastq files through enaDataGet
#49
CharlesNunn001
closed
1 year ago
2
Some SRA accession numbers don't work.
#48
rpolicastro
closed
1 year ago
2
minor fix to avoid escaping the colon character in the url
#47
harryhaemin
closed
4 years ago
1
Urlencoding
#46
josieburgin
closed
4 years ago
0
FileNotFoundError for temp.txt
#45
sweramesh
closed
4 years ago
1
Add filename for failed or incomplete downloads
#44
orangebromeliad
opened
5 years ago
0
Feature Request: Continue after failed download
#43
ckuenne
closed
6 years ago
1
enaGroupGet doesn't throw an exception when it fails to download one accession
#42
tobsecret
opened
6 years ago
11
Add enaBrowserTools to Bioconda channel
#41
janstrauss1
opened
6 years ago
2
Aspera installation hints
#40
bewt85
closed
6 years ago
5
ensDataGet for entity with absent default files gives random binary output
#39
swingingsimian
closed
6 years ago
2
ASERA_BIN detection broken on mac/python3.6.5
#38
swingingsimian
closed
6 years ago
3
Failing to connect to sequence read database/server
#37
jwasmuth
closed
6 years ago
3
Implement a progress output handler for ftp and aspera downloads
#36
froggleston
opened
6 years ago
1
Fetching genomes sometimes get stuck
#35
jjkoehorst
closed
1 year ago
9
Citing
#34
jjkoehorst
opened
6 years ago
2
Download of paired-end reads fails in python 2.7
#33
mzganec
closed
6 years ago
2
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