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epi2me-labs
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wf-16s
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BAM files in the no_host_bam folder
#29
sachiwije
closed
2 weeks ago
1
Ways to improve minimap classification?
#28
osvatic
closed
1 month ago
3
discrepancy between counts in html report and in kraken2.assignments.tsv
#27
ramiroricardo
closed
2 months ago
1
minimap_pipeline:makeReport (1) error with custom database
#26
jadeaver
closed
2 months ago
8
minimap_pipeline:makeReport (1) error with custom database
#25
jadeaver
closed
3 months ago
2
No "species" level information in the "Lineages" section
#24
drabitoris
closed
2 months ago
5
Instead of taxonomic assignment to "Unknown", classifying to the next highest taxonomic level
#23
el3rin
closed
2 months ago
4
How to obtain a phylogenic tree
#22
CamillePhilippeSCI
closed
2 months ago
3
(Singularity) Container missing dependencies
#21
marchoeppner
closed
4 months ago
7
Direct additional report tables to output directory
#20
aliciamrich
closed
4 months ago
2
How to pull a previous version of the workflow?
#19
irc47
closed
5 months ago
2
Only 96 BC at the time
#18
CamillePhilippeSCI
closed
5 months ago
9
prepare_database fails
#17
hanburglarbabel
closed
5 months ago
2
Error creating report in Kraken
#16
rachelhawrit
closed
4 months ago
3
column "runid" not existed in file: fastcat_stats/per-read-stats.tsv.gz
#15
yanchunzhang
closed
6 months ago
1
Support for database stored on a network drive
#14
nikelau
closed
6 months ago
1
[Demo] ERROR ~ Error executing process > 'minimap_pipeline:makeReport (1)'
#13
nikelau
closed
7 months ago
1
Empty file for workflow (even on demo)
#12
nikelau
closed
7 months ago
2
Error making html report
#11
CGD-Helix
closed
7 months ago
3
Error 137 (out of memory?) during report generation
#10
osilander
closed
8 months ago
3
Update README.md
#9
aleimba
closed
8 months ago
2
html report generation errors out when there are 0 classified reads
#8
osilander
closed
8 months ago
3
option to specify output directory other than config file
#7
osilander
closed
8 months ago
0
Error when making reports
#6
yanchunzhang
closed
7 months ago
7
Error when making report
#5
yanchunzhang
closed
10 months ago
1
Grouping of samples
#4
joe0750
closed
7 months ago
4
Report format
#3
llk578496
closed
7 months ago
8
running with test_data
#2
HannahBenisty
closed
1 year ago
7
running test data
#1
HannahBenisty
closed
1 year ago
1