issues
search
epiforecasts
/
inc2prev
Estimate epidemiological quantities from repeated cross-sectional prevalence measurements
http://epiforecasts.io/inc2prev/
BSD 3-Clause "New" or "Revised" License
16
stars
7
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
PDF link and figures are gone
#45
sbfnk
opened
10 months ago
0
add pgkdown
#44
sbfnk
closed
1 year ago
0
Output results for full duration of the pandemic?
#43
tomwenseleers
closed
1 year ago
5
Fix dead link to processed data
#42
theosanderson
closed
2 years ago
1
redefine variables
#41
sbfnk
closed
2 years ago
1
Fixes to local estimates
#40
sbfnk
closed
2 years ago
0
Allow estimation with max report date
#39
sbfnk
closed
2 years ago
0
Generate local-level antibodies
#38
sbfnk
closed
2 years ago
0
Replace `load_all` with package install
#37
sbfnk
closed
2 years ago
0
update initial values
#36
sbfnk
closed
2 years ago
0
issue when running inc2prev
#35
albertosanchezmarroquin
closed
2 years ago
4
minor paper edits; waning estimates now monthly
#33
sbfnk
closed
2 years ago
0
Paper
#32
seabbs
closed
2 years ago
1
switch to arrays
#31
sbfnk
closed
2 years ago
0
Fit to multiple datasets simultaneously
#30
sbfnk
closed
2 years ago
0
save separate population data for antibodies
#29
sbfnk
closed
2 years ago
0
Draft writeup
#28
sbfnk
closed
2 years ago
0
Antibody model fix
#27
sbfnk
closed
2 years ago
2
Additional plots
#26
sbfnk
closed
2 years ago
0
Age groups for aggregating ab age groups produce NAs
#25
jdmunday
closed
2 years ago
1
Differences model fixes
#24
sbfnk
closed
2 years ago
5
merge changes from `gp_on_r`
#23
sbfnk
closed
2 years ago
0
Feature explicit pcr model
#22
seabbs
opened
2 years ago
1
Outline of approach to fitting counts with scaling
#21
seabbs
opened
2 years ago
0
Feature: forecasting
#20
seabbs
closed
2 years ago
2
update devcontainer settings
#19
seabbs
closed
2 years ago
0
Example: Adding support for n differences
#18
seabbs
closed
2 years ago
4
Jacobian adjustment due to change of variables.
#17
seabbs
closed
2 years ago
1
Example: First difference GP on logic
#16
seabbs
closed
2 years ago
1
GP on r
#15
sbfnk
closed
2 years ago
6
Add optional support to fit to count data with CFR/IFR correction
#14
seabbs
opened
2 years ago
2
Update to support multiple antibody levels + booster shots
#13
seabbs
opened
2 years ago
2
fix vaccination data by NHSE region
#12
sbfnk
closed
2 years ago
0
Synthesise
#11
sbfnk
closed
2 years ago
0
pass samples to i2p_draws as external variable
#10
sbfnk
closed
2 years ago
1
Damn those antibodies are delayed
#9
seabbs
closed
2 years ago
1
Add more antibody limitation detail
#8
seabbs
closed
2 years ago
0
Antibodies are tricky...
#7
seabbs
closed
2 years ago
10
Reorganisation mega-merge/rebase
#6
sbfnk
closed
2 years ago
0
modifications to work with modelled CIS estimates
#5
sbfnk
closed
2 years ago
0
Improve prev figure
#4
seabbs
closed
3 years ago
0
add tools and change naming
#3
seabbs
closed
3 years ago
0
Adds appropriate data uncertainties
#2
seabbs
closed
3 years ago
0
Adding measurement uncertainty to prevalence estimates
#1
seabbs
closed
3 years ago
0