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erikrikarddaniel
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pfitmap
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Replace static hmm logos with skylign
#117
erikrikarddaniel
opened
10 years ago
0
Too few sequences returned
#116
erikrikarddaniel
opened
10 years ago
0
How to handle robots?
#115
erikrikarddaniel
opened
10 years ago
0
Choosing without clicking
#114
erikrikarddaniel
closed
10 years ago
2
What are the two extra domains in the ribbon diagram?
#113
erikrikarddaniel
closed
10 years ago
1
Showing database sometimes highlights two
#112
erikrikarddaniel
closed
10 years ago
2
Ribbon diagram failure
#111
erikrikarddaniel
closed
10 years ago
1
Add accession numbers to count_matrix
#110
erikrikarddaniel
closed
10 years ago
1
count_matrix: sort protein columns hierarchically
#109
erikrikarddaniel
opened
10 years ago
0
How should we handle wgs not in RefSeq but elsewhere in NR?
#108
erikrikarddaniel
closed
10 years ago
1
Why doesn't Pseudomonas syringae pv. morsprunorum str. M302280 have an enzyme?
#107
erikrikarddaniel
closed
10 years ago
1
Log message for import of protein_counts is misleading
#106
erikrikarddaniel
closed
10 years ago
1
Strain on all taxa
#105
erikrikarddaniel
closed
10 years ago
1
Can deleting old protein_counts be made quicker?
#104
erikrikarddaniel
closed
10 years ago
3
Do not slice taxa for the WGS case
#103
erikrikarddaniel
closed
10 years ago
1
Deprecation message from pfitmap_release_spec.rb
#102
erikrikarddaniel
closed
10 years ago
1
An organism may have several entries in a single database
#101
erikrikarddaniel
closed
10 years ago
1
Taxon names sometimes disappear from the GUI
#100
erikrikarddaniel
closed
10 years ago
1
NrdDh groups (or all protein groups) are not loaded for GenBank
#99
erikrikarddaniel
closed
10 years ago
2
Uncultured organisms do not have superkingdom
#98
erikrikarddaniel
closed
10 years ago
1
Showing a pfitmap_release takes ages...
#97
erikrikarddaniel
opened
10 years ago
0
Add PFL
#96
erikrikarddaniel
opened
10 years ago
0
Calculate fails on GenBank with timeout
#95
erikrikarddaniel
closed
10 years ago
1
Indicate choices in protein counts view
#94
erikrikarddaniel
closed
10 years ago
0
Change name of circos diagram to "Ribbon diagram"
#93
erikrikarddaniel
closed
10 years ago
0
Toggle zeros with checked columns should filter rows with zero for these columns
#92
erikrikarddaniel
closed
10 years ago
0
Select database to show
#91
binnisb
closed
10 years ago
0
Over counting genoems with proteins
#90
binnisb
closed
10 years ago
0
GenBank export
#89
erikrikarddaniel
closed
10 years ago
1
.fasta export from statistics interface
#88
erikrikarddaniel
closed
10 years ago
1
Add accession numbers to protein_count
#87
erikrikarddaniel
closed
10 years ago
1
Import sequence from SLLBioSQL to DBSequence
#86
erikrikarddaniel
opened
10 years ago
0
Add gis to BioSQL fetch queue if not present
#85
erikrikarddaniel
closed
10 years ago
3
Create model SequenceDatabase
#84
binnisb
closed
10 years ago
0
Odd patterns
#83
erikrikarddaniel
closed
10 years ago
0
When there is space in taxon filterin, we loose the filtering
#82
binnisb
closed
10 years ago
0
Change column names to proper, full names in statistics interface
#81
erikrikarddaniel
closed
10 years ago
1
Change link from "Browse RNR statistics" on first page
#80
erikrikarddaniel
closed
10 years ago
1
Reimplement calculate
#79
erikrikarddaniel
closed
10 years ago
0
Remove reference from protein to hmm_profile
#78
erikrikarddaniel
closed
10 years ago
0
Create released_db model and refer to it from protein_count, protein and taxon
#77
erikrikarddaniel
closed
10 years ago
5
Add columns to load_database
#76
erikrikarddaniel
closed
10 years ago
0
.fasta file imports take long.
#75
erikrikarddaniel
opened
10 years ago
0
Add pfitmap_release and sequence_database to protein_count, protein and taxon
#74
erikrikarddaniel
closed
10 years ago
1
Create load_database model
#73
erikrikarddaniel
closed
10 years ago
2
Filter zeros
#72
erikrikarddaniel
closed
10 years ago
0
Old releases loose their taxons when new one is calculated
#71
binnisb
closed
10 years ago
1
BiosqlWeb call fails, debug and fix
#70
binnisb
closed
10 years ago
1
Put boarders around selected cells / row / columns
#69
binnisb
closed
10 years ago
0
Color by disappears when changing taxon level / changes filtering
#68
binnisb
closed
10 years ago
0
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