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fiji
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Colocalisation_Analysis
Fiji's plugin for colocalization analysis
http://imagej.net/Coloc_2
GNU General Public License v3.0
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Results window does not appear
#76
EBrna
opened
7 months ago
0
Costes randomization occurs over bounding box of ROI instead of ROI region itself
#75
andmccall
opened
2 years ago
3
Black Image Instead of 2D Intensity Histogram
#74
ScientistRachel
closed
2 weeks ago
14
Fix Colocalisation_Test window crash on multiple runs
#73
pvlaraia
closed
2 weeks ago
2
Pearson's correlation from ImageJ2 macro
#72
christianrickert
closed
3 years ago
1
Wrong limits of 2D intensity histogram for float or 16-bit input images
#71
bene51
opened
4 years ago
3
Gui fitting large image
#70
nafisahis
closed
6 years ago
0
Pdf show axis label
#69
nafisahis
closed
6 years ago
1
PDFWriter: add regression line to histogram
#68
nafisahis
closed
6 years ago
1
Fix typo in GUI
#67
WillGiang
closed
6 years ago
0
java.lang.NoClassDefFoundError: com/itextpdf/text/BadElementException
#66
pawlowska
closed
7 years ago
2
Adding a Manual Threshold Mode
#65
lacan
opened
7 years ago
12
Exception while trying to use Coloc2
#64
zeitgeist1
closed
7 years ago
3
not able to run the plugin after installation
#63
Tushar-87
closed
7 years ago
5
Access Log Window Statistics Output by API
#62
stephanmg
closed
7 years ago
1
Ops: AutoThresholdRegression
#61
etadobson
closed
6 years ago
0
Ops: Costes Significance Test
#60
etadobson
closed
6 years ago
0
Ops: Li Histogram2D
#59
etadobson
closed
6 years ago
0
Ops: Histogram2D
#58
etadobson
closed
6 years ago
1
Ops: Manders split coefficients
#57
etadobson
closed
6 years ago
0
Ops: Spearman rank correlation
#56
etadobson
closed
6 years ago
0
Ops: Pearsons correlation coefficient (PCC)
#55
etadobson
closed
6 years ago
0
Ops: liICQ
#54
etadobson
closed
7 years ago
3
Results: PDF output, warnings appear in the middle of the results
#53
etadobson
closed
7 years ago
0
DataContainer: eliminate Masks concepts and rely on ImgLib2 native RAI support
#52
etadobson
opened
7 years ago
0
Closing windows created by Coloc2 in macro
#51
BrazilianFIJItsu
opened
7 years ago
4
UnitTests: Write test for InputCheck class???
#50
chalkie666
opened
7 years ago
0
Added warnings in case of negative pixel values
#49
haesleinhuepf
closed
7 years ago
4
Need to add input data check for non physical negative values
#48
haesleinhuepf
closed
7 years ago
5
Fix dialog parameters to avoid duplicate keywords
#47
imagejan
closed
8 years ago
4
Add Protein Proximity Index
#46
stelfrich
opened
8 years ago
6
Update current log window to ImageJ2-style results window
#45
etadobson
opened
8 years ago
0
Make Coloc_Job_Name value result
#44
chalkie666
closed
8 years ago
1
Fix issue33
#43
chalkie666
closed
8 years ago
4
Add a Gitter chat badge to README.md
#42
gitter-badger
closed
9 years ago
0
Algorithms: turn the type interface into a SciJava plugin type
#41
chalkie666
opened
9 years ago
0
Algorithms: Change algorithms class into an Interface
#40
chalkie666
opened
9 years ago
0
Results: simplify the Interface : ResultHandler
#39
chalkie666
opened
9 years ago
4
Gadgets: Simplify by Factoring out the DataContainer???
#38
chalkie666
opened
9 years ago
0
Algorithms: ArrayIndex out of bounds: 512x512x46 px, 32 bit images input (184 MB)
#37
chalkie666
opened
9 years ago
10
Scatterplot green vs red pixel intensity - possible generic color scheme?
#36
etadobson
closed
9 years ago
7
Results: add mask type: "none", "ROI" or "mask image" to results output
#35
chalkie666
closed
7 years ago
3
Results: cant output PDF results in a macro without user interaction to click ok.
#34
chalkie666
opened
9 years ago
16
Results: put channel name tag (Ch1 or Ch2) in channel name in results output.
#33
chalkie666
closed
8 years ago
0
Results: Bug: Large images don't fit in results display gui, and there are no scroll bars, or z slider
#32
chalkie666
closed
6 years ago
0
Results Dashboard v2: General plan
#31
chalkie666
opened
9 years ago
1
Input GUI v2: input image handling
#30
chalkie666
opened
9 years ago
2
Input GUI v2: general idea
#29
chalkie666
opened
9 years ago
3
Manders real noisy test
#28
chalkie666
closed
9 years ago
18
Input GUI v2 and Results Dashboard v2: Design the "real" Coloc_2 GUI
#27
chalkie666
opened
9 years ago
1
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