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fractal-analytics-platform
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fractal-tasks-core
Main tasks for the Fractal analytics platform
https://fractal-analytics-platform.github.io/fractal-tasks-core/
BSD 3-Clause "New" or "Revised" License
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Improve args-schema-creation tools
#453
tcompa
closed
1 year ago
1
Review dependencies (especially dask)
#452
tcompa
closed
1 year ago
0
450 reorder task inputs
#451
jluethi
closed
1 year ago
1
Reorder task inputs in create_ome_zarr, create_ome_zarr_multiplexing
#450
jluethi
closed
1 year ago
3
Use tuple for default `ROI_table_names` value in `copy_ome_zarr`
#449
tcompa
closed
1 year ago
2
Update `ROI_table_names` argument of `copy_ome_zarr`
#448
tcompa
opened
1 year ago
7
Include titles for custom-model-typed arguments or argument attributes
#447
tcompa
closed
1 year ago
1
Include title for custom-model-typed task arguments
#446
tcompa
closed
1 year ago
0
Improve handling of pydantic models upon creating args schemas
#445
tcompa
closed
1 year ago
4
Which library provides tasks schemas for `create_schema_for_single_task`?
#444
jluethi
closed
1 year ago
0
Remove the delete option from yokogawa to ome zarr
#443
jluethi
closed
1 year ago
2
Remove delete option from yokogawa to ome zarr task
#442
jluethi
closed
1 year ago
0
Turn off file deletion option in yokogawa to ome zarr
#441
jluethi
closed
1 year ago
1
Update pydantic model docstrings
#440
jluethi
closed
1 year ago
4
To review: Optional arrays/objects should not have side effects
#439
tcompa
opened
1 year ago
7
Move input Pydantic models to main package (close #437)
#438
tcompa
closed
1 year ago
1
Move pydantic input schemas to core
#437
jluethi
closed
1 year ago
3
Parse docstrings for nested argument models
#436
ychiucco
closed
1 year ago
1
Make check_args_schemas.py errors more informative
#435
tcompa
closed
1 year ago
1
Improve dev tools to validate function signatures
#434
tcompa
closed
1 year ago
1
Update `metadata_table` arguments
#433
tcompa
closed
1 year ago
1
Update `metadata_table` argument of `create_ome_zarr_multiplex.py`
#432
tcompa
closed
1 year ago
4
Upate arguments of `illumination_correction`` (close #414)
#431
tcompa
closed
1 year ago
1
429 change order of json schema properties
#430
tcompa
closed
1 year ago
1
Change order of JSON Schema properties
#429
tcompa
closed
1 year ago
1
Update anndata (version and `write_elem` import)
#428
tcompa
closed
1 year ago
1
Update anndata (version and import source of `write_elem`)
#427
tcompa
closed
1 year ago
3
Improve coverage of core library functions
#426
tcompa
closed
1 year ago
3
Split tests folder into core/tasks (ref #391)
#425
tcompa
closed
1 year ago
1
First attempt at splitting tests into core/tasks
#424
tcompa
closed
1 year ago
2
imageio warning
#423
tcompa
opened
1 year ago
0
Define input models for Cellpose&Napari tasks
#422
tcompa
closed
1 year ago
1
Review docstrings of argument models
#421
tcompa
closed
1 year ago
7
Making `coordinateTransformations` flexible for axes & comply with spec (include channels transformation)
#420
jluethi
closed
1 year ago
14
Make `check_args_schemas` error message more informative
#419
tcompa
closed
1 year ago
0
Parse docstrings for nested argument models
#418
tcompa
closed
1 year ago
1
Failed sphinx build unexpectedly returns 0
#417
tcompa
closed
1 year ago
1
395 update docs re new extra
#416
tcompa
closed
1 year ago
1
Review usage of `output_path`
#415
jluethi
closed
6 months ago
0
Add Pydantic model for illumination correction: `dict_corr`
#414
jluethi
closed
1 year ago
4
Task parameter review
#413
jluethi
closed
1 year ago
14
Add Pydantic model for cellpose channel input?
#412
jluethi
closed
1 year ago
1
Review 2D & 3D image handling in napari workflows
#411
jluethi
opened
1 year ago
1
Introduce pydantic model for channels
#410
tcompa
closed
1 year ago
2
Pin Pydantic to V1
#409
tcompa
closed
1 year ago
0
407 make validate arguments decorator required
#408
tcompa
closed
1 year ago
1
Make `validate_arguments` decorator required
#407
tcompa
closed
1 year ago
0
Relax constraint on torch version
#406
tcompa
closed
1 year ago
1
Store main docstrings in the manifest
#405
tcompa
closed
1 year ago
3
Add Pydantic model for some `napari_workflows_wrapper` arguments
#404
tcompa
closed
1 year ago
7
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