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funkelab
/
gunpowder
A library to facilitate machine learning on multi-dimensional images.
https://funkelab.github.io/gunpowder/
MIT License
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Fixed misleading docstring for MergeProvider
#165
erjel
closed
2 years ago
4
Add WKW (webknossos) source provider
#164
erjel
closed
2 years ago
1
Add Resample and AsType
#163
rhoadesScholar
closed
2 years ago
5
resample written - untested
#162
rhoadesScholar
closed
3 years ago
0
random seed bug in stack node
#161
abred
closed
1 year ago
1
Expose chunk shape in write nodes
#160
bentaculum
closed
1 year ago
1
ZarrWrite upstream of Scan with multiple workers leads to empty patches in written array
#159
bentaculum
opened
3 years ago
2
Fix skip_empty check (use any instead of sum)
#158
Steffen-Wolf
closed
3 years ago
1
Check empty should not use sum != 0
#157
Steffen-Wolf
closed
1 year ago
1
Combination of RandomLocation and Reject provide repeated batches from the same source Roi
#156
bentaculum
closed
10 months ago
4
Extend docs for Reject
#155
bentaculum
closed
2 years ago
2
Total Roi with nonspatial Array
#154
bentaculum
closed
3 years ago
1
In NoiseAugment, call assert for data in [0, 1] only if clip is True
#153
Steffen-Wolf
closed
2 years ago
3
Add hook to filter snapshots
#152
bentaculum
closed
3 years ago
1
Add hook for data-dependent snapshots
#151
bentaculum
closed
3 years ago
4
Kainmueller lab v1.2 dev simple augment
#150
pattonw
closed
3 years ago
1
fix simple_augment:transpose bug if shapeX!=shapeY
#149
abred
closed
3 years ago
1
Remove unnecessary deep copy from (Un)Squeeze
#148
bentaculum
closed
3 years ago
0
Transfer torch tensors to GPU asynchronously
#147
bentaculum
closed
1 year ago
7
Add missing tqdm dependency
#146
bentaculum
closed
3 years ago
2
Update random_location.py
#145
yajivunev
closed
3 years ago
4
merging batch requests only updates roi
#144
neptunes5thmoon
closed
3 years ago
5
Update random_location.py
#143
yajivunev
closed
3 years ago
0
Better handling of nonspatial arrays, rois that are None
#142
cmalinmayor
closed
10 months ago
1
Docs v1.2 search links broken
#141
bentaculum
closed
1 year ago
1
Merge v1.2-dev
#140
pattonw
closed
3 years ago
0
update node attribute storage and retrieval
#139
pattonw
closed
3 years ago
0
Rasterize graphs
#138
pattonw
closed
3 years ago
0
Add support for zarr snapshots
#137
pattonw
closed
3 years ago
0
gp.Snapshot: verify that arrays in dataset_names in request
#136
abred
closed
4 years ago
0
gp Train: train node should add inputs to request
#135
abred
closed
3 years ago
0
add arg to add_affinities to be able to set dtype
#134
abred
closed
4 years ago
0
remove channel dim (if it exists) from label shape in add_affinities
#133
abred
closed
3 years ago
0
Bugfix upsample request larger upstream roi
#132
cmalinmayor
closed
3 years ago
0
Possible performance bug with predict nodes and shared memory
#131
trivoldus28
opened
4 years ago
0
Make Coordinate add and mul operations commutative
#130
bentaculum
closed
4 years ago
0
optionally use TF.data.dataset instead of feed_dict
#129
abred
closed
3 years ago
0
Auto mixed precision for tensorflow
#128
abred
closed
3 years ago
0
add is_training flag to tf train/predict nodes
#127
abred
closed
3 years ago
0
add optional point id to points source
#126
abred
closed
4 years ago
0
add_affinities: dtype, channel dim
#125
abred
closed
4 years ago
2
snapshot/train: check requests
#124
abred
closed
4 years ago
2
add #workers/cache to precache log
#123
abred
closed
4 years ago
0
random_loc: shifts are valid if at least one coordinate is non-zero
#122
abred
closed
4 years ago
3
show upstream nodes in profiling when using stack
#121
abred
closed
4 years ago
0
scan: lower bound max_shift by min_shift
#120
abred
closed
4 years ago
0
batch_request: update request with spec from dependencies
#119
abred
closed
3 years ago
9
add arg to intensityaugment to disable clipping
#118
abred
closed
4 years ago
2
cast mask_integral in random loc. to proper integral dtype
#117
abred
closed
4 years ago
0
ignore interrupts in worker processes
#116
abred
closed
3 years ago
4
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