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garikoitz
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launchcontainers
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Fix symlink name from brianmask.nii.gz to brain.nii.gz
#86
yongninglei
closed
1 week ago
0
[fix]rtp2-preproc will all use brian.nii.gz
#85
yongninglei
closed
3 weeks ago
1
rtp2-preproc should always use brain.nii.gz and never brainmask.nii.gz
#84
garikoitz
opened
3 weeks ago
1
Check dask: -N -m send email, and on DIPC
#83
yongninglei
opened
1 month ago
5
317 update
#82
yongninglei
closed
1 month ago
0
Needs to update the printed information so that it is easier to debug
#81
yongninglei
closed
1 month ago
1
Needs to update the example container specific config files, now they are wrong!
#80
yongninglei
closed
1 month ago
2
L1 glm and new dask
#79
yongninglei
opened
2 months ago
0
Add control: prepare onset files if or not
#78
yongninglei
opened
2 months ago
0
l1_GLM is not using prepare analysis folder
#77
yongninglei
opened
2 months ago
0
add new function copy configs
#76
yongninglei
closed
2 months ago
0
Refactory fs and rtp2
#75
yongninglei
closed
2 months ago
0
If there are 2 fszip, which one to select?
#74
yongninglei
closed
2 months ago
2
get jobs in the last step of parallel mode
#73
leandrolecca
closed
3 months ago
0
version 0.2.104 poetry lock and toml
#72
yongninglei
closed
3 months ago
0
Parallelize njobs
#71
leandrolecca
closed
3 months ago
0
Fix hardcode and config.json input
#70
yongninglei
closed
3 months ago
0
launch parallel jobs in local
#69
leandrolecca
closed
3 months ago
1
Freesurferator
#68
leandrolecca
closed
3 months ago
1
change launchcontainer 0.1.1 version on readme
#67
yongninglei
closed
3 months ago
1
Creation of analysis dir is hard coded, needs to change that.
#66
yongninglei
closed
2 months ago
1
Fix pa and change generate cmd
#65
yongninglei
closed
7 months ago
0
Change PA dwiF and dwiR bug, delete the module load print for JP, change the bind for JP
#64
yongninglei
closed
7 months ago
1
workflow figure in wiki
#63
yongninglei
closed
8 months ago
2
Changed readme and update how to use
#62
yongninglei
closed
8 months ago
0
update package to v0.0.6
#61
yongninglei
closed
8 months ago
0
using BIDS layout should obey the yaml setting of bids dir name
#60
yongninglei
closed
6 months ago
1
launchcontainer version 2
#59
yongninglei
closed
8 months ago
0
update on RTPPREPREOC prepare_dwi.py
#58
yongninglei
closed
9 months ago
0
createsymlink are not in BIDS format
#57
yongninglei
closed
9 months ago
1
fix typo of logging in lc.py
#56
yongninglei
closed
10 months ago
1
Dask question: the job can only be launched using dask progress bar. why? can we fix it?
#55
yongninglei
closed
2 months ago
2
fixed problems, update prepare_analysis_dir, fix typo
#54
yongninglei
closed
10 months ago
0
session name
#53
yongninglei
closed
9 months ago
2
fix print_only mode and add auto analysis folder
#52
yongninglei
closed
11 months ago
1
print cmd and client.gather
#51
yongninglei
closed
12 months ago
0
print cmd
#50
yongninglei
closed
12 months ago
1
add pybids in lc
#49
yongninglei
closed
2 months ago
4
client map
#48
leandrolecca
closed
12 months ago
0
Add logging into lc, so that the print infomation is clean and simple
#47
yongninglei
closed
6 months ago
1
Yongninglei patch 3
#46
yongninglei
closed
1 year ago
0
logo for launchcontainer
#45
yongninglei
closed
1 year ago
2
Concatenate dwi.nii.gz, dwi.bval & dwi.bvec
#44
leandrolecca
closed
1 year ago
1
edits to make LC work in DIPC
#43
leandrolecca
closed
1 year ago
0
implement dask with ubuntu cluster
#42
yongninglei
closed
10 months ago
2
implement the qsub parameter in the code, right now it isn't used
#41
yongninglei
closed
10 months ago
1
requirement.txt
#40
yongninglei
closed
10 months ago
0
trying to make the documentation more beautiful
#39
yongninglei
closed
1 year ago
0
in run mode, we only need to pass the config_lc.yaml
#38
garikoitz
opened
1 year ago
1
Remove all the cluster messages when prepare mode is being run
#37
garikoitz
closed
10 months ago
1
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