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SINGE
Gene regulatory network reconstruction from pseudotemporal single-cell gene expression data
MIT License
11
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5
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Option to output scores for all edges and regulators
#25
agitter
opened
5 years ago
0
Error when dropping samples
#24
agitter
closed
5 years ago
0
Prepare SINGE Docker container
#23
agitter
closed
5 years ago
0
Config files handling
#22
atuldeshpande
closed
4 years ago
2
Update name in readme
#21
agitter
closed
5 years ago
0
Rebrand to SINGE
#20
agitter
closed
4 years ago
1
Update parameter parsing
#19
agitter
closed
5 years ago
1
Prepare Docker container with MATLAB runtime
#18
agitter
closed
4 years ago
2
Command line interface for SINGE
#17
agitter
closed
4 years ago
0
Test running SCINGE inside MATLAB Docker container
#16
agitter
closed
5 years ago
6
Mex Fortran interface
#15
agitter
closed
5 years ago
4
Store example output data for testing
#14
agitter
closed
5 years ago
0
Test running SINGE inside Octave Docker container
#13
agitter
opened
5 years ago
11
Add placeholder Travis config file
#12
agitter
closed
5 years ago
0
Expression data in tab separated text files
#11
atuldeshpande
opened
5 years ago
1
Add bioRxiv citation to readme
#10
agitter
closed
5 years ago
0
Regulator list
#9
agitter
closed
2 years ago
1
OSG Connect support
#8
agitter
opened
5 years ago
1
Document random seed construction
#7
agitter
closed
5 years ago
2
Example for High Throughput Computing
#6
atuldeshpande
opened
5 years ago
3
Data file descriptions, add version number, expose prob_remove_samples and date parameters
#5
atuldeshpande
closed
5 years ago
0
Test Octave support for continuous integration testing
#4
agitter
opened
5 years ago
3
Glmnet mex error on Windows 10
#3
agitter
opened
5 years ago
1
Added help on SCINGE.m and made iffile backwards compatible
#2
atuldeshpande
closed
5 years ago
1
Update readme and license description
#1
agitter
closed
5 years ago
0
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