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hanchenphd
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GMMAT
Generalized linear Mixed Model Association Tests
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Error: inv_sympd(): matrix is singular or not positive definite
#62
Jia21
opened
6 months ago
6
Is unordered multi classification or ordered multi classification variable supported?
#61
xiahui625649
opened
7 months ago
3
Can SMMAT work for small sample size?
#60
jxcao98
closed
8 months ago
8
v1.4.1
#59
hanchenphd
closed
12 months ago
0
Use of GMMAT GLMM approach for predictive modelling
#58
JonChan0
closed
8 months ago
3
Error in GMMAT
#57
zhangyuan5422
opened
1 year ago
3
SMMAT n.p==0 Error
#56
alexisregelson
closed
1 year ago
1
Class probabilities in output
#55
LiliiaY
closed
1 year ago
2
SMMAT not reading grouping file
#54
alexisregelson
closed
1 year ago
6
Heritability (h2) estimation
#53
YinLiLin
opened
1 year ago
3
Improved error control in glmmkin
#52
hanchenphd
closed
1 year ago
0
Dev
#51
hanchenphd
closed
1 year ago
0
Parallelization glmm.wald
#50
wsproviero
opened
1 year ago
3
ERROR glmm.wald()
#49
MARCPUCV
closed
1 year ago
2
Meta-analysis for single score test
#48
AIDrina
closed
2 years ago
0
glmm.score segmentation fault
#47
AlecJacobsen
closed
2 years ago
3
Group file sorted differently in SMMAT vs. SMMAT.meta
#46
g3png
opened
2 years ago
4
Error in glmm.wald(): "the leading minor of order # is not positive definite"
#45
luciamayorf
opened
2 years ago
1
Error in readLines(infile) : 'con' is not a connection - glmm.wald test
#44
HKJ396
opened
2 years ago
6
Error in glm.score
#43
hkj7
opened
2 years ago
13
Error in glmm.score basic_string::substr: __pos (which is 18446744073709551615) > this->size() (which is 0)
#42
dylkot
closed
2 years ago
1
Meta-analysis P-value decreases, despite same direction and marginally significant in both populations
#41
dylkot
opened
2 years ago
2
Error in eval(parse(text = x, keep.source = FALSE)[[1L]]) : object 'SNP__' not found
#40
dylkot
closed
2 years ago
5
Using dosages from text file or VCF
#39
dylkot
closed
2 years ago
6
Error in Single Variant Wald Test
#38
ryshi06
closed
2 years ago
7
Meta-analysis for single score test error
#37
ryshi06
closed
2 years ago
1
Issue when building the null model
#36
yuliu426
opened
2 years ago
4
burden effect size in SMMAT
#35
agilly
closed
2 years ago
2
added better error catching when default method davies fails
#34
agilly
closed
2 years ago
5
glmm.wald. SNP names in when infile is gds
#33
gustavahlberg
closed
3 years ago
3
Dev
#32
hanchenphd
closed
3 years ago
0
how to add SNP*time interaction in glmmkin and glmm.score?
#31
ConnieXuhm
closed
3 years ago
4
glmm.wald producing NA output
#30
mfknie
closed
3 years ago
2
How could I get the group definition file?
#29
lpalvin
closed
3 years ago
4
matric is singular or not positive definite issue
#28
malawsky
closed
3 years ago
3
p values for betas
#27
malawsky
closed
3 years ago
1
Calculate effect size for minor allele (A1) in the glmm.wald() test
#26
ryshi06
closed
3 years ago
2
Error reading bimfile
#25
yuliu426
closed
3 years ago
5
How can I calculate Odds ratio or Z-score from the outcome of glmm.score?
#24
ConnieXuhm
closed
3 years ago
2
Variance estimate on the boundary of the parameter space observed, refitting model...
#23
ryshi06
closed
3 years ago
7
Saddlepoint approximation in `.pKuonen()`
#22
dwoll
closed
3 years ago
4
glmmkin is slow with a large sample size
#21
yiyangphd
closed
3 years ago
3
glmm.wald exporting all NAs
#20
ntilhou
closed
3 years ago
1
glmm.wald returning only NAs
#19
ntilhou
closed
3 years ago
1
glmm.wald exporting only NA
#18
ntilhou
closed
3 years ago
5
Test freezes
#17
youngchanpark
closed
3 years ago
15
Changelog for 1.3.1?
#16
agilly
closed
3 years ago
1
GMMAT 1.3.1
#15
duytpm16
closed
4 years ago
0
ANOVA between 2 glmkin models
#14
TeaByrd
closed
3 years ago
1
Progress bar for SMMAT
#13
PaulTimmers
closed
3 years ago
2
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