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hiruna72
/
squigualiser
Visualise and analyse nanopore (ONT) raw signals
https://hiruna72.github.io/squigualiser/
MIT License
100
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1
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Extracting plot data question
#64
wpearman1996
opened
1 month ago
1
using readpaf locally
#63
hiruna72
closed
2 months ago
0
Dev
#62
hiruna72
closed
2 months ago
0
Problem of caculate_base_base_shift
#61
JeremyQuo
closed
2 months ago
3
squigualiser/docs /RNA_visualisation.md
#60
vetmohit89
closed
2 months ago
9
Base-Wise alginment question
#59
xianyu0623
closed
3 months ago
2
Unable to plot even with right coordinates
#58
moa4020
closed
2 months ago
26
add selenium to requirements
#57
hiruna72
closed
3 months ago
0
Problems with save_svg
#56
laulambr
closed
3 months ago
5
An error trying to plot the rna004
#55
hasindu2008
closed
3 months ago
5
Dev
#54
hiruna72
closed
4 months ago
0
Question about squigualiser reform
#53
JeremyQuo
closed
5 months ago
15
Squigualiser will not accept slow5 file created by squigualator
#52
jsthv
closed
5 months ago
8
fix the link because google is sunsetting page.link in 2025
#51
hasindu2008
closed
6 months ago
1
handle fastq records with name + comment
#50
hiruna72
closed
7 months ago
0
Read_ID not found in fastq file
#49
denisbeslic
closed
7 months ago
11
Reform parameters (-k & -m) for RNA002 libraries?
#48
lkwhite
closed
7 months ago
4
Stride length unit
#47
lkwhite
closed
8 months ago
2
Dev
#46
hiruna72
closed
9 months ago
0
More docs improvements
#45
hasindu2008
closed
9 months ago
0
squigualiser realign gives only multiples of stride(=5) in the original model
#44
Marjan-Hosseini
closed
8 months ago
3
update docs
#43
hiruna72
closed
9 months ago
0
Dev
#42
hiruna72
closed
9 months ago
0
tag mv not found
#41
UmairK291095
closed
7 months ago
4
Readme updates
#40
hasindu2008
closed
9 months ago
0
plot_tracks doesn't exist
#39
kaltinel
closed
10 months ago
2
Squig pileup region error
#38
katiestoker
closed
10 months ago
8
better help messages
#37
hiruna72
closed
10 months ago
0
Cli update
#36
Psy-Fer
closed
10 months ago
0
Cli update
#35
Psy-Fer
closed
10 months ago
0
Add files via upload
#34
hasindu2008
closed
10 months ago
0
Update snake.yml
#33
hasindu2008
closed
10 months ago
0
Update snake.yml
#32
hasindu2008
closed
10 months ago
0
update setup.py and manifest file added
#31
hiruna72
closed
11 months ago
0
Dev
#30
hiruna72
closed
11 months ago
0
pileup function for direct RNA seq data
#29
kaltinel
closed
11 months ago
6
Base shift
#28
hiruna72
closed
11 months ago
0
Profile
#27
hiruna72
closed
1 year ago
0
Base shift calculation
#26
hiruna72
closed
1 year ago
0
Setup script exited with error: SandboxViolation
#25
Grant-Fox
closed
10 months ago
8
import local .py files correctly
#24
hiruna72
closed
1 year ago
0
Update requirements.txt
#23
WeipengMO
closed
1 year ago
1
Dev
#22
hiruna72
closed
1 year ago
0
Dev
#21
hiruna72
closed
1 year ago
0
Text scale
#20
hiruna72
closed
1 year ago
0
Dev
#19
hasindu2008
closed
1 year ago
0
Problems about plot
#18
JeremyQuo
closed
1 year ago
9
Fix for hover issue
#17
kisarur
closed
1 year ago
0
Question about squiggle algorithms
#16
JeremyQuo
closed
1 year ago
1
Trying to make the documentation clear
#15
hasindu2008
closed
1 year ago
0
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