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hubmapconsortium
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portal-visualization
Given HuBMAP Dataset JSON, creates a Vitessce configuration
MIT License
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Tkakar/cat 673 create builder for seg mask
#92
tkakar
opened
3 weeks ago
1
NickAkhmetov/CAT-775 - EPIC builders boilerplate, migrate API client
#91
NickAkhmetov
closed
2 months ago
0
NickAkhmetov/CAT-665 Improve builder support for vislifting pyramids
#90
NickAkhmetov
closed
4 months ago
0
NickAkhmetov/CAT-643 Improve multiomic view configs
#89
NickAkhmetov
closed
4 months ago
0
NickAkhmetov/Visium spot radius fix
#88
NickAkhmetov
closed
5 months ago
0
NickAkhmetov/Adjust to use single ATAC Column
#87
NickAkhmetov
closed
5 months ago
0
Extend `_get_scale_factor()` to take units into account
#86
NickAkhmetov
opened
5 months ago
0
NickAkhmetov/10X Builder, adjust visium spot opacity
#85
NickAkhmetov
closed
5 months ago
2
NickAkhmetov/Improve vis-lifting logic, add visium support
#84
NickAkhmetov
closed
7 months ago
3
NickAkhmetov/HMP-532 Add predicted CL ID to visualizations
#83
NickAkhmetov
closed
7 months ago
1
NickAkhmetov/HMP-540/Update `get_view_config_builder` to use `get_assaytype` instead of `get_assay`
#82
NickAkhmetov
closed
9 months ago
0
NickAkhmetov/HMP-159 Upgrade vitessce-python dependency
#81
NickAkhmetov
closed
1 year ago
4
(chore): version bump
#80
ilan-gold
closed
1 year ago
0
(feat): add `use_full_resolution` feature for NanoDESI
#79
ilan-gold
closed
1 year ago
4
NickAkhmetov / HMP-99 / Improve user-passed marker gene handling, fix spatial anndata view connection
#78
NickAkhmetov
closed
1 year ago
1
Bump version to 0.0.10 in advance of new release.
#77
lchoy
closed
1 year ago
0
[HMP-78] Handle entities with no metadata in view config builder factory
#76
lchoy
closed
1 year ago
0
Bump version to 0.0.9 for release
#75
john-conroy
closed
1 year ago
0
(feat): support new annotations
#74
ilan-gold
closed
1 year ago
0
(feat): support new annotations
#73
ilan-gold
closed
1 year ago
6
Bump version
#72
john-conroy
closed
1 year ago
0
Mccalluc/consistent names
#71
mccalluc
opened
1 year ago
0
search-api also uses this
#70
mccalluc
closed
1 year ago
0
Migrate to v3 search
#69
mccalluc
closed
1 year ago
0
stub out a demonstration of how integrative analysis could work
#68
mccalluc
opened
1 year ago
0
trivial cleanup in builder_factory
#67
mccalluc
opened
1 year ago
0
Mccalluc/consistent arrays
#66
mccalluc
opened
1 year ago
0
Add `--index`
#65
mccalluc
closed
1 year ago
1
Mccalluc/fix unstitched
#64
mccalluc
closed
2 years ago
0
Tighten signature
#63
mccalluc
opened
2 years ago
0
Mccalluc/highlight codex
#62
mccalluc
closed
2 years ago
2
`marker_gene` -> `marker`
#61
mccalluc
closed
2 years ago
0
Highlight genes for more assay types?
#60
mccalluc
closed
2 years ago
0
Reformat JSON fixtures
#59
mccalluc
closed
2 years ago
0
update example URL
#58
mccalluc
closed
2 years ago
0
Spatial RNA-seq example doesn't work
#57
mccalluc
closed
2 years ago
1
Eliminate unneeded conditional
#56
mccalluc
closed
2 years ago
0
Explain limitations of CLI token
#55
mccalluc
closed
2 years ago
0
Could `client_kwargs` be unconditional?
#54
mccalluc
closed
2 years ago
3
Add Headers to zarr requests.
#53
ilan-gold
closed
2 years ago
0
Add missing src/
#52
mccalluc
closed
2 years ago
0
Target 3.9 on github CI; Loosen upper bounds on dependencies
#51
mccalluc
closed
2 years ago
0
explain "installation"
#50
mccalluc
closed
2 years ago
0
Make Sure `KeyError` is Thrown
#49
ilan-gold
closed
2 years ago
10
Add `gene_alias` for RNA-seq
#48
ilan-gold
closed
2 years ago
1
Mccalluc/marker gene
#47
mccalluc
closed
2 years ago
9
bump version numbers
#46
mccalluc
closed
2 years ago
2
Mccalluc/add cli
#45
mccalluc
closed
2 years ago
0
Make CLI
#44
mccalluc
closed
2 years ago
0
Update README.md with new release process
#43
mccalluc
closed
2 years ago
0
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