isaacovercast PTA issues

isaacovercast / PTA

Phylogeographic Temporal Analysis

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Implement Hill numbers

#24 isaacovercast opened 3 years ago
0
Import momi error after PTA installation.

#23 gehara opened 4 years ago
0
Check Omega calculation

#22 isaacovercast opened 4 years ago
0
msfs.to_dataframe() on real data adds a 0 column

#21 isaacovercast opened 4 years ago
1
multiSFS.to_df doesn't preserve popnames

#20 isaacovercast opened 4 years ago
0
Variation on SFS tag order

#19 gehara closed 4 years ago
4
Zeta variation with fixed tau

#18 gehara closed 4 years ago
2
serial_simulate time count

#17 gehara closed 4 years ago
1
we need a sweet PTA logo

#16 isaacovercast opened 4 years ago
0
Build conda package

#15 isaacovercast opened 4 years ago
1
Allow to import from dadi/fsc format

#14 isaacovercast opened 4 years ago
0
Add a _simulate() method that directly uses msprime as the backend so we can get the haplotype data

#13 isaacovercast opened 4 years ago
0
Allow unfolded SFS

#12 isaacovercast opened 4 years ago
0
Manuscript Empirical Dataset Ideas Go Here

#11 isaacovercast opened 4 years ago
9
v.2.0 - Implement grid search on parameters

#10 isaacovercast opened 4 years ago
1
Implement buffering

#9 isaacovercast opened 4 years ago
0
A cool plotting idea

#8 isaacovercast opened 4 years ago
0
Small things we talked about that i'll fix soon

#7 isaacovercast closed 4 years ago
2
v.2.0 - Species-specific simulation parameters to add

#6 gehara opened 4 years ago
1
Fix mSFS as proportions

#5 isaacovercast opened 4 years ago
0
mSFS as matrix + CNN

#4 isaacovercast opened 4 years ago
0
Incorporate summaries of the Psi, tau, and epsilon vectors

#3 isaacovercast closed 4 years ago
1
Sorting frequency class bins?

#2 isaacovercast closed 4 years ago
1
Load shape of empirical data to match simulations

#1 isaacovercast opened 4 years ago
2