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introunet
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Unit tests
#36
xin-huang
closed
4 months ago
0
Private mutations
#35
xin-huang
closed
4 months ago
0
models used
#34
xin-huang
closed
4 months ago
4
Datasets and DataLoaders
#33
xin-huang
closed
4 months ago
0
when to stop
#32
xin-huang
closed
4 months ago
4
h5 files for 1M samples
#31
xin-huang
closed
6 months ago
2
`input_channels`
#30
xin-huang
closed
4 months ago
1
License
#29
xin-huang
closed
4 months ago
0
introunet review
#28
xin-huang
closed
6 months ago
1
ICLR 2024
#27
xin-huang
closed
4 months ago
0
use `pandas.to_hdf5()`
#26
xin-huang
closed
4 months ago
0
integrate `format_from_vcf_df` with `preprocess`
#25
xin-huang
closed
4 months ago
2
New preprint with graph convolutional networks
#24
xin-huang
closed
4 months ago
5
interpretation
#23
xin-huang
closed
4 months ago
0
batch size
#22
xin-huang
closed
4 months ago
1
Original model
#21
xin-huang
opened
6 months ago
0
Add train.unet.smk
#20
xin-huang
closed
6 months ago
0
Refactor intronets_train.smk
#19
xin-huang
closed
6 months ago
0
Refactor `intronets_simulate_training_set_fixed_sample_size.smk` and `intronets_simulate_training_set_many_samples.smk`
#18
xin-huang
closed
6 months ago
1
Batches
#17
xin-huang
closed
6 months ago
1
Refactor intronets_simulate_training_set.snake
#16
xin-huang
closed
6 months ago
4
running time for `intronets_simulate_training_set.snake`
#15
xin-huang
closed
6 months ago
3
Literature
#14
xin-huang
closed
4 months ago
1
Padding?
#13
xin-huang
closed
4 months ago
0
name `shutil` is not defined
#12
xin-huang
closed
6 months ago
0
process_vcf_df_windowed_multiproc() got an unexpected keyword argument `one_target`
#11
xin-huang
closed
6 months ago
0
No module named `utils`
#10
xin-huang
closed
6 months ago
0
Update env.yml
#9
xin-huang
closed
6 months ago
0
No module named `data_functions`
#8
xin-huang
closed
6 months ago
0
No module named `intronets_run`
#7
xin-huang
closed
6 months ago
1
Add env.yml
#6
xin-huang
closed
6 months ago
0
test data
#5
xin-huang
closed
4 months ago
2
Add `env.yml`
#4
xin-huang
closed
6 months ago
1
hdf5
#3
xin-huang
closed
6 months ago
1
Replace seriation with self-attention
#2
xin-huang
closed
4 months ago
4
run snakemake in the computing nodes
#1
xin-huang
closed
4 months ago
0