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janelia-flyem
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gala
Automatic segmentation of electron microscopy volumes
BSD 3-Clause "New" or "Revised" License
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gala.sparselol_cy
#100
SandmanSpartan
opened
2 years ago
1
pip installs another package called gala
#99
xiuliren
opened
3 years ago
7
Update gala to be compatible with networkx 2 and other modern libs
#98
jni
closed
3 years ago
0
Request Docker image or updated version of GALA
#97
Khoa-NT
opened
3 years ago
15
Where and why to ignore 0 in VI?
#96
Keep-Passion
closed
4 years ago
3
help me new to python
#95
BOOM5s
closed
4 years ago
1
Package miscellaneous files
#94
jakirkham
closed
3 years ago
2
Include tests for image_type
#93
JohnnyTeutonic
opened
7 years ago
6
Launch gala server from command line
#92
jni
closed
7 years ago
0
New function to accept multiple images for segmentation
#91
JohnnyTeutonic
closed
7 years ago
29
Change docstring for rand_values
#90
JohnnyTeutonic
closed
7 years ago
1
Remove bug in ARE in evaluate.py
#89
JohnnyTeutonic
closed
7 years ago
15
Fix VTK file IO
#88
jni
closed
7 years ago
1
[WIP] communication protocol with BigDataViewer proofreading client
#87
jni
closed
7 years ago
2
Ensure `agglo.Rag.separate_fragments` leaves a consistent graph
#86
jni
opened
8 years ago
0
Add functions to read and write volumes with CREMI's HDF5 format
#85
jni
closed
8 years ago
1
Implement @mjanusz's edge batching
#84
jni
closed
8 years ago
2
unexpected keyword argument 'random_state'
#83
thanujadax
closed
8 years ago
2
Speedup
#82
jni
closed
8 years ago
1
agglo.py runtime warning and and unmerged output
#81
thanujadax
closed
8 years ago
10
Explore zarr as a back-end for Gala labeled arrays
#80
jni
opened
8 years ago
0
Benchmark building ijv triplets from CSR
#79
jni
opened
8 years ago
0
Some bug fixes and speed improvements
#78
jni
closed
8 years ago
0
errors while running py.test
#77
ajavvadi
closed
7 years ago
7
Fix test_serve to use two threads, one for server and one for proofreader
#76
jni
opened
8 years ago
0
Update dependencies
#75
jni
closed
8 years ago
0
Bugfixes
#74
tobiasmaier
closed
8 years ago
1
Rag.split_vi() broken
#73
tobiasmaier
closed
8 years ago
0
Rag.set_ground_truth() broken
#72
tobiasmaier
closed
8 years ago
0
agglo.best_possible_segmentation()
#71
tobiasmaier
closed
8 years ago
0
Add CITATION file
#70
jni
closed
8 years ago
0
Find way to activate long testing in Travis easily
#69
jni
opened
8 years ago
2
[MRG] Add ZMQ solver and simulated client
#68
jni
closed
8 years ago
0
Fix behavior of contingency table ignored rows
#67
jni
closed
8 years ago
0
Ignored rows should still be created in evaluate.contingency_table
#66
jni
closed
8 years ago
0
Add functions for training on multiple volumes
#65
jni
opened
8 years ago
0
Fix learning mode
#64
jni
closed
8 years ago
0
`_learn_agglomerate` doesn't use learning mode
#63
jni
closed
8 years ago
7
Add CONTRIBUTING.md file
#62
jni
opened
8 years ago
0
Remove Python 2.7 support
#61
jni
closed
8 years ago
1
Add PyPI classifiers to setup
#60
jni
closed
8 years ago
0
Add two default feature managers
#59
jni
closed
8 years ago
0
Allow use of DVID volumes as back-end
#58
jni
opened
9 years ago
3
Select best classifier using auto-sklearn
#57
jni
opened
9 years ago
0
Fix README URL for PLoS One article
#56
jefferis
closed
9 years ago
1
Further changes to reduce memory footprint
#55
jni
closed
9 years ago
0
Reduce memory usage and speed up computation
#54
jni
closed
9 years ago
2
Remove support for 0-labeled boundaries
#53
jni
closed
9 years ago
0
KeyError when adding boundary with label 0 in oversegmentation
#52
neptunes5thmoon
closed
9 years ago
6
KeyError in rag.learn_agglomerate(...)
#51
funkey
closed
9 years ago
3
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