jeffdaily parasail-python issues

jeffdaily / parasail-python

Python bindings for the parasail C library.

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issues

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how to out put all location of local alignment

#75 yipukangda opened 1 week ago
4
Failed to build parasail>=1.1.12 on M1 Mac

#74 MasaakiU opened 6 months ago
0
How to use the traceback for alignment visualization?

#73 goodez opened 8 months ago
1
Bioconda recipe for macosx-arm64?

#72 a-munoz-rojas opened 10 months ago
8
can ARM machine install this module？

#71 unavailable-2374 closed 11 months ago
2
parasail_memalign: posix_memalign failed: Cannot allocate memory

#70 silenus092 opened 1 year ago
4
PSSM support in Python

#69 shenker opened 1 year ago
1
Use of threads in library.

#68 kako-f opened 1 year ago
3
Fix macos wheel generation in CI

#67 JacobHayes closed 1 year ago
0
"'parasail_sg_qb_db' not found" on Windows with v1.3

#66 fbrennen closed 1 year ago
12
1.3 macos wheels

#65 JacobHayes closed 1 year ago
1
prevent premature deletion

#64 maxbachmann opened 1 year ago
2
Traceback with nw_banded

#63 joshquick closed 2 years ago
1
MAINT: Add parasail headers to Python wheel.

#62 jvkersch closed 1 year ago
1
Cigar returns unmatches as leading deletions

#61 cgjosephlee opened 3 years ago
0
Missing wheels on PyPI

#60 cjw85 closed 3 years ago
4
Repeatedly choosing back-to-back single base indels when a match is expected

#59 rsharris opened 3 years ago
8
Does any interface documentation exist, beyond that in the readme?

#58 rsharris opened 3 years ago
4
Install error with parasail v1.2.2

#57 jkomyno closed 3 years ago
11
Test failures on arm64

#56 nileshpatra opened 3 years ago
7
Error installing parasail on macos

#55 grst closed 3 years ago
9
TypeError: __init__() missing 1 required positional argument: 's1b'

#54 N-damo closed 3 years ago
3
Loop over list of strings

#53 agartland closed 4 years ago
2
Semi-global alignment without penalties for gaps in the end of both sequences.

#52 tprodanov closed 1 year ago
2
Shipping parasail headers inside the Python egg?

#51 jvkersch closed 1 year ago
2
Testsuite

#50 iiSeymour closed 4 years ago
0
Running test suite in travis.

#49 iiSeymour closed 1 year ago
4
Build wheels with cibuildwheel

#48 iiSeymour closed 4 years ago
23
Install parasail without internet nor root permissions

#47 GuillaumeHolley closed 4 years ago
1
Silent failure with nw_trace_scan_16 for larger sequences

#46 ifiddes opened 4 years ago
1
Cigar format using ssw

#45 rmcolq opened 4 years ago
2
Trying to install parasail without internet

#44 cytham closed 4 years ago
1
First go at manylinux builds

#43 cjw85 closed 4 years ago
3
Right Gaps, but not Left Gaps, Counting Toward nw_stat().length Attribute

#42 kmayerb opened 5 years ago
0
set version of C parasail library for build//install

#41 EricDeveaud opened 5 years ago
0
use LD_LIBRARY_PATH to find libparasail

#40 fizwit closed 5 years ago
2
get alignment positions

#39 FlorianBrnrd opened 5 years ago
4
confuse '=' with 'X' when accessing a SAM CIGAR

#38 zhenLiuXplr closed 5 years ago
2
Semi-global alignment results printing

#37 suzannejin closed 5 years ago
2
setup.py fails to find libparasail.so. Does not search LD_LIBRARY_PATH

#36 fizwit opened 5 years ago
1
compilation issue

#35 wyim-pgl closed 5 years ago
2
wheel not found, prevents pip install on Python 3.7.2, parasail-python 1.1.16

#34 daveuu closed 5 years ago
4
libparasail.so missing in 1.1.15

#33 kulesha closed 5 years ago
9
installation with conda

#32 ksahlin opened 5 years ago
10
New release including traceback?

#31 srgok closed 5 years ago
1
Broken Python3 string encoding conversion

#30 hernot closed 5 years ago
4
Allowing negative score in semi-global alignment

#29 mdcao closed 5 years ago
20
new symbol not found problem on OS X on parasail import

#28 tlambert03 closed 5 years ago
4
Traceback/Local Alignment String Output Help

#27 jihoonk1495 closed 5 years ago
8
libparasail.so in LD_LIBRARY_PATH not found during installation

#26 HenrikBengtsson closed 5 years ago
3