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jhennies
/
CebraEM
MIT License
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Table mobie
#66
jhennies
opened
1 month ago
0
Update README.md
#65
jhennies
closed
2 months ago
0
Update README.md
#64
jhennies
closed
3 months ago
0
Python error in quantile_norm of module pulp
#63
mrheinnecker
opened
3 months ago
0
Invalid cpu configuration on slurm cluster
#62
mrheinnecker
opened
3 months ago
0
Bug-fixes
#61
jhennies
closed
3 months ago
0
Update readme
#60
jhennies
closed
3 months ago
0
Update readme
#59
jhennies
closed
3 months ago
0
Cebra em wf
#58
jhennies
closed
3 months ago
0
Cebra em wf
#57
jhennies
closed
3 months ago
0
Cebra em wf
#56
jhennies
closed
4 months ago
0
Update CebraNET_README.md
#55
jhennies
closed
10 months ago
0
Click commandline interfaces
#54
dokempf
closed
8 months ago
3
Bioconda packaging
#53
dokempf
opened
11 months ago
0
PyPI Packaging
#52
dokempf
opened
11 months ago
0
Merge the three Python packages into one
#51
dokempf
opened
11 months ago
0
Apply pre-commit with formatting/linting to the project
#50
dokempf
opened
11 months ago
0
Reduce/Remove interactive elements
#49
dokempf
opened
11 months ago
0
Switch command line interfaces to click
#48
dokempf
opened
11 months ago
0
Cebra em wf
#47
jhennies
closed
11 months ago
0
Error when exiting field of extracted area during gt annotation in napari
#46
mrheinnecker
opened
11 months ago
0
Stitching works only for one beta value per segmentation
#45
mrheinnecker
closed
1 month ago
1
include scaling function for post-processing
#44
mrheinnecker
opened
11 months ago
0
Missing 64x64 image cubes after stiching of segmentation
#43
mrheinnecker
opened
1 year ago
0
Bug-fix for CebraEM project without mask
#42
jhennies
closed
1 year ago
0
Cebra em wf
#41
jhennies
closed
1 year ago
0
minimum for multicut weights selectable in combo box
#40
jhennies
closed
1 year ago
0
Cebra em wf
#39
jhennies
closed
1 year ago
0
Cebra em wf
#38
jhennies
closed
1 year ago
0
Inverted raw
#37
jhennies
closed
1 year ago
0
Cebra em wf
#36
jhennies
closed
1 year ago
0
installation for linux fails on pc without cuda
#35
mzugravu
opened
1 year ago
0
Error in rule quantile norm, KeyError: 'quantile_samples' at final segmentation
#34
masbeckwith
opened
1 year ago
4
Python KeyError at final segmentation: Manually initialized 'segmentations' in config file
#33
mrheinnecker
opened
1 year ago
3
quantile_norm snakejob requires more than 32G memory
#32
mrheinnecker
closed
1 year ago
2
CebraEM: Downloading CebraNET model from bioimageio if it is not avai…
#31
jhennies
closed
1 year ago
0
CebraEM: Adjusting stitching memory requirements
#30
jhennies
closed
1 year ago
0
Cebra em wf
#29
jhennies
closed
1 year ago
0
CebraEM: missing segmentations entry in segmentation config
#28
jhennies
closed
1 year ago
0
Mobie project validation fails
#27
jhennies
opened
1 year ago
1
CebraEM: Allowing execution in unknown operating systems
#26
jhennies
closed
1 year ago
0
Assertion in crop_and_scale a bit too strict
#25
jhennies
closed
1 year ago
0
CebraEM: Quantile normalization by randomly sampling pixels
#24
jhennies
closed
1 year ago
0
CebraEM: Quantile normalization terribly inefficient when mask has objects with large bounding boxes
#23
jhennies
closed
1 year ago
4
CebraEM: Add a cluster setup json
#22
jhennies
opened
1 year ago
0
CebraEM: Table in MoBIE project misses anchors
#21
jhennies
opened
1 year ago
0
Added stitching
#20
jhennies
closed
1 year ago
0
CebraANN: Bug fix in cleanup
#19
jhennies
closed
1 year ago
0
CebraEM: Stitching required
#18
jhennies
closed
1 year ago
1
CebraANN: Clean-up broken
#17
jhennies
closed
1 year ago
1
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