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jhkorhonen
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MOODS
MOODS: Motif Occurrence Detection Suite
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How to install this moudle on Windows?
#48
MrLiBowen
opened
2 months ago
0
Remove -march=native from MOODS/python /setup.py?
#47
zia1138
opened
1 year ago
4
TypeError specifically when using --best-hits
#46
plger
opened
1 year ago
0
moods-dna.py: Segmentation fault (core dumped) for long motifs
#45
osyafinkelberg
opened
1 year ago
2
mood-score threshold choice for a given p-value and PWM is different across chromosomes
#44
osyafinkelberg
opened
1 year ago
4
Fix a bunch of compilation warnings from clang++.
#43
adam-azarchs
opened
1 year ago
0
How could I add threads in `moods-dna.py` ?
#42
jiangpuxuan
opened
2 years ago
0
No parse matrix with first order PWM with scoring
#41
cmandier
opened
2 years ago
0
counts_max_hits function in Scanner class unavailable in MOODS 1.9.4.1
#40
rogadde
opened
2 years ago
1
`--p-value 0.001` returns motif matches with negative scores
#39
alexlenail
closed
2 years ago
2
document difference between `threshold_from_p_with_precision` vs `threshold_from_p`
#38
alexlenail
opened
2 years ago
3
Is there a way to write results to output file progressively
#37
alexlenail
closed
2 years ago
4
`illegal hardware instruction`: Apple M1
#36
alexlenail
closed
2 years ago
1
MOODS.search() deprecated? 1.9.4.1 locally installed via pip for python3.7
#35
kandabarau
opened
3 years ago
1
Is this package still being maintained?
#34
laserson
closed
3 years ago
1
Windows installation
#33
denklewer
opened
3 years ago
1
Cannot install on python 3.8.2
#32
gintarebucaite
closed
3 years ago
1
Migration path from v1.0.2.1 to v1.9.4.1
#31
michael-imbeault
closed
4 years ago
7
[install,bug] setup.py contain files that are not in master branch
#30
shouldsee
closed
4 years ago
1
Hit index in the reverse complement direction
#29
gencouchchu
opened
4 years ago
2
Needed setuptools
#28
fabio-t
closed
5 years ago
4
Rel/v1.9.4
#27
fabio-t
closed
5 years ago
0
motif mapping not correct?
#26
YichaoOU
opened
5 years ago
6
How to we specify indels? Advertised functions do not exist?
#25
YichaoOU
opened
5 years ago
2
installation MOODS-python-1.9.3
#24
RafaelMViana
closed
5 years ago
1
MOODS coredumps when motif file does not exist
#23
ghuls
opened
5 years ago
0
Does MOODS take into account multiple testing correction?
#22
doczmp
opened
6 years ago
2
Py3, Python extension? Where does the Python extension <count_log_odds> go?
#21
zhenyisong
closed
6 years ago
3
Support old architectures when compiling
#20
brettolsen
opened
6 years ago
3
Problem with MOODS and Centos 6.5
#19
mdurante1
closed
6 years ago
3
P-value as score
#18
iamjli
opened
7 years ago
1
Input file format
#17
sudhirjadhao
closed
7 years ago
5
adding precision argument to threshold_from_p
#16
fabio-t
closed
5 years ago
2
Different log_odds output between MOODS and Biopython
#15
fabio-t
opened
7 years ago
3
PyPi package
#14
fabio-t
closed
5 years ago
13
Multiprocessing on moods_dna.py
#13
vmesel
opened
7 years ago
3
Match Scores
#12
imk1
opened
7 years ago
9
Probability PWM matrices
#11
prince26121991
closed
7 years ago
1
Error with PWM input
#10
jfreimer
closed
8 years ago
1
build setup
#9
sjneph
closed
8 years ago
1
mac installation
#8
jorgeboucas
closed
7 years ago
8
Compilation and installation problems
#7
biogberg
closed
8 years ago
5
MOODS-python-1.9.1 error
#6
ekaasine
closed
8 years ago
7
MOODS 1.9.0- problem running example
#5
mazrooei
closed
8 years ago
6
install MOODS python extention module for python3
#4
joshuabhk
closed
6 years ago
4
Failure to install under python3
#3
jonathan-wells
closed
9 years ago
1
Incorrect PWM scores reported by MOODS
#2
chiyang
closed
9 years ago
1
error when the pfm file contains float value
#1
zhilongjia
closed
9 years ago
1