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jiarong
/
VirSorter2
customizable pipeline to identify viral sequences from (meta)genomic data
GNU General Public License v2.0
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FileNotFoundError virsorter/group file and with the test run
#174
LaurenceHdL
opened
1 year ago
8
Error in rule classify_full_and_part_by_group:
#173
TiAmoTYX
opened
1 year ago
6
VirSorter2 error in hmmserch step
#172
huajiachicat
opened
1 year ago
4
How to generate viral-affi-contigs-for-dramv.tab for dramv on viral genomes from multiple tools?
#171
krausfeldtle
opened
1 year ago
3
control conda environment prefix
#170
jowodo
opened
1 year ago
1
Numpy float error not fixed in version 2.2.4
#169
DNADoubleFelix
opened
1 year ago
2
error with an RNA group
#168
trilisser
closed
1 year ago
6
Error in rule hmmsearch:
#167
quliping
closed
1 year ago
5
-j 30 Does not match the actual number of working threads. Why
#166
qkqk-hub
closed
1 year ago
6
Hallmark gene of each genome
#165
YuyaKiguchi
opened
1 year ago
2
ValueError
#164
MalloryCunninghamVCU
opened
1 year ago
1
Error: ValueError: invalid version number 'UserWarning:'
#163
HaimAshk
opened
1 year ago
12
Error in rule merge_split_faa_gff_by_group: jobid: 837
#162
zhengqibonan
opened
1 year ago
2
Error in rule merge_split_faa_gff_by_group: jobid: 837
#161
zhengqibonan
opened
1 year ago
0
Error
#160
dnolin13
opened
1 year ago
1
final-viral-boundary.tsv file missing
#159
dnolin13
opened
1 year ago
5
forgot using --keep-original-seq parameter
#158
778055611
opened
1 year ago
3
Could not create conda environment
#157
TKsh6
closed
1 year ago
8
Error in rule classify_by_group
#156
dangchenyuan
opened
1 year ago
14
Error when rerunning VS2
#155
dnolin13
opened
1 year ago
1
error when I Run VirSorter2 again
#154
paulamaza
opened
1 year ago
3
Stuck on step 3
#153
dnolin13
opened
1 year ago
2
I only can run 1 single sample ,but cant run the merged file
#152
778055611
opened
1 year ago
5
Dear VirSorter2 team
#151
778055611
closed
1 year ago
1
when i use virsorter2, i met a question, need some help!!!!!!!!!!!!!!!!!!!!!!!!!
#150
cbw606
opened
1 year ago
4
sed: can't read for-dramv/final-viral-combined-for-dramv.fa: No such file or directory
#149
ZongzhiWu
opened
1 year ago
1
when i use virsorter2, i met a question, need some help!!
#148
liucong0429
closed
1 year ago
16
Error in rule merge_split_faa_gff:
#147
DugauquierR
opened
1 year ago
9
COVID detection available?
#146
yqy6611
opened
1 year ago
1
error of "AttributeError: module 'numpy' has no attribute 'float'"
#145
ChaoLab
closed
1 year ago
4
cat: iter-0/pp-circular.fna.splitdir/pp-circular.fna.0.split.pdg.splitgff: No such file or directory
#144
cho7-31
closed
1 year ago
2
Inconsistency in prophage detection
#143
davidtong28
closed
1 year ago
5
Error in rule circular_linear_split
#142
DrYoungOG
closed
1 year ago
4
Headers in final-viral-combined.fa
#141
deminatanja
closed
1 year ago
1
Best assembly for further usage in VirSorter2
#140
deminatanja
closed
2 years ago
2
Prophage detection and coordinates
#139
asierFernandezP
closed
2 years ago
2
Error in rule merge_split_faa_gff
#138
erichy91
closed
2 years ago
4
Issues with prep for DRAM
#137
dnolin13
closed
2 years ago
5
Module 'skip' not found.
#136
tnn111
opened
2 years ago
12
DRAMv - No descriptions were found for your id's.
#135
carmennns2
closed
2 years ago
2
Where can I found category types in VirSorter results
#134
timeresistance1996
closed
2 years ago
0
The hmmsearch -T {threads} does not reach to its full capacity
#133
ChaoLab
closed
2 years ago
1
Strange error
#132
dnolin13
closed
2 years ago
1
Can Virsorter2 detect new virus?
#131
woodoo46
closed
2 years ago
1
empty final-viral-combined.fa
#130
woodoo46
closed
2 years ago
1
The problem about which orf is marked as hallmark gene
#129
plainchicken
opened
2 years ago
0
error when running test.fa
#128
DeaconOfBiology
closed
1 year ago
3
How can one speed up the run? (particularly hmmsearch)
#127
fluhus
closed
2 years ago
2
Issue with --prep-for-dramv part of SOP
#126
yugen-miyahara
closed
2 years ago
4
Question about virsorter SOP and using checkV
#125
yugen-miyahara
closed
2 years ago
2
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