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jokergoo
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simplifyEnrichment
Simplify functional enrichment results
https://jokergoo.github.io/simplifyEnrichment
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New feature request for simplifyGOFromMultipleLists
#110
frylhc
opened
5 days ago
1
Increase simplifyGOFromMultipleLists bar plot width
#109
tfguinan
opened
2 weeks ago
0
Using labels from `simplifyGO` in ComplexHeatmap
#108
yesitsjess
closed
1 month ago
0
GO_similarity error
#107
sugiYag
closed
1 day ago
6
Clusters with unrelated gene sets (overlap coefficient = 0)
#106
adomingues
opened
5 months ago
0
adjust the cluster orders
#105
jokergoo
opened
8 months ago
0
summarizedGO()
#104
jokergoo
opened
8 months ago
0
error in MCL clustering
#102
NereaSanchis
opened
8 months ago
0
Why the `simplifyGOFromMultipleLists(lt)` has less clusters than the components?
#101
danli349
opened
8 months ago
1
Customize simplifyGOFromMultipleLists plot
#100
kotliary
opened
9 months ago
1
Problem with clustering
#99
GuiSeSanz
opened
9 months ago
1
Error: 'keyword enrichment from GO' is not an exported object from 'namespace:simplifyEnrichment'
#98
Jzwing
closed
10 months ago
2
Parallelize keyword enrichment
#97
j-andrews7
opened
11 months ago
0
Error: rsession-arm64: UnableToOpenBlob
#96
sherryfan030
opened
11 months ago
0
vignettes need to be updated
#95
jokergoo
opened
1 year ago
0
increase size of word clouds with anno_word_cloud_from_GO
#94
ALbpASC
opened
1 year ago
0
Cannot use TCSS with GO_similarity
#93
lillianhorin
opened
1 year ago
0
Getting the data from compare_clustering_methods
#92
je71xusa
opened
1 year ago
0
Error in getFromNamespace
#91
sonoko97
opened
1 year ago
2
Error in anno_word_cloud
#90
l-magnificence
opened
1 year ago
0
Add annotation to the heatmap
#89
harimchun
opened
1 year ago
0
Add bar plot to simplifyGOFromMultipleLists
#88
jelman
closed
1 year ago
1
Retain phrasing and keep "-" in word clouds
#87
yaaminiv
opened
1 year ago
0
Error simplifyGOFromMultipleLists() version 1.8
#86
IrSoler
opened
1 year ago
2
Error in simplifyGOFromMultipleLists
#85
merveyrc
opened
1 year ago
0
exclude_words not working
#84
fedenichetti
opened
1 year ago
0
Installation: Error in anno_zoom(...)
#83
Deepesh123gupta
opened
1 year ago
0
how to know which GO annotation (after binary cut) corresponds to which cluster
#82
sadiexiaoyu
opened
1 year ago
0
Singletons
#81
GreenGilad
opened
1 year ago
0
Error message when running simplifyEnrichment function with clusterProfiler::GSEA() output
#80
ftencaten
opened
1 year ago
1
Return dendrogram from binary_cut
#79
GreenGilad
opened
1 year ago
1
Retrieve dendrogram created by binary cut
#78
GreenGilad
opened
1 year ago
1
namespace error when calling simplifyGO
#77
russtafayyazi
opened
2 years ago
0
Ontology for simplifyGOFromMultipleLists
#76
brovolia
opened
2 years ago
1
allow self-defined text in textbox annotations
#75
jokergoo
opened
2 years ago
0
Error in simplifyGOFromMultipleLists
#74
Knight1995
opened
2 years ago
2
Problem with using function simplifyGOFromMultipleLists
#73
BBJamge
opened
2 years ago
0
cluster heatmap looks weird
#72
xcliu-oc
opened
2 years ago
3
change cat to message
#71
jokergoo
closed
2 years ago
0
not found simplifyGOFromMultipleLists function
#70
cao523
opened
2 years ago
1
Assign a representative GO term to each cluster
#69
eggrandio
opened
2 years ago
3
simplifyGOFromMultipleLists not found
#68
neuralsm
closed
2 years ago
1
bug in simplifyGOFromMultipleLists
#67
aa20g217
closed
2 years ago
0
Usage of anno_word_cloud
#66
hsiaoyi0504
opened
2 years ago
1
Retrieving the similarity values
#65
ttumkaya
opened
2 years ago
1
infinite loop
#64
jokergoo
opened
2 years ago
0
groups should be clustered by default
#63
jokergoo
opened
2 years ago
0
Allow additional Heatmaps to be passed to `export_to_shiny_app`.
#62
j-andrews7
opened
2 years ago
0
to-do list (mainly for text analysis)
#61
jokergoo
opened
3 years ago
1
simplifyGO() function doesn't work anymore
#60
JingLi98-666
closed
2 years ago
4
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