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jsh58
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DMRfinder
Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data
MIT License
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combine_CpG_sites sample number issue
#19
Kumahgshin
opened
3 months ago
1
Input data for methylation count extraction.
#18
desmodus1984
opened
5 months ago
1
not working on Bismark run with bowtie --local
#17
JHBI115
closed
4 months ago
2
Issue using combine_CpG_sites.py with supplied example
#16
nickyph
opened
12 months ago
1
Update findDMRs.r to resolve issue #13
#15
yganwork
closed
5 months ago
0
Parallel computing for DMR
#14
Kennyluo4
opened
2 years ago
0
findDMRs.r error
#13
dahun73
opened
3 years ago
9
Multiple Errors with dispersion.shrinkage.BSseq
#12
npatel22526
closed
4 years ago
2
Can I use customized region for finding significant DMR?
#11
Honchkrow
closed
4 years ago
2
Is it appliable for analysing Bisulfite sequencing data?
#10
sixone11
closed
5 years ago
2
Error! Missing information for sample "control1.1.fq" from input file combined.csv. Valid sample names are: control1 control2 test1_0 test2_0
#9
sixone11
closed
5 years ago
2
Error in `[<-.data.frame`(`*tmp*`, , !col %in% dss & !substr(col, 1, nchar(col) - : replacement has 0 items, need 10 Calls: [<- -> [<-.data.frame Execution halted
#8
khl0798
closed
5 years ago
2
findDMR
#7
Lux91
closed
5 years ago
9
Manual clustering info
#6
Lux91
closed
5 years ago
2
How can I provide pair information to do pairwise differential methylation analysis?
#5
bishwaG
closed
5 years ago
5
What is the issue with bismark >0.15.0
#4
greatfireball
closed
6 years ago
2
coverage2cytosine result doesn't fit input format of combine_CpG_sites.py
#3
lixin4306ren
closed
6 years ago
0
extract_CpG_data.py issue
#2
jsh58
closed
6 years ago
11
combine_CpG_sites.py issue
#1
svrever
closed
6 years ago
20