karel-brinda NanoSim-H issues

karel-brinda / NanoSim-H

NanoSim-H: a simulator of Oxford Nanopore reads; a fork of NanoSim.

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issues

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Models for R10 flow cell

#22 HLHsieh opened 1 year ago
1
training stuck in model fitting

#21 thackl opened 3 years ago
2
question about mismatch, insertion and deletion rate

#20 ashinandjay opened 4 years ago
0
New version of NanoSim-H

#19 karel-brinda closed 3 years ago
0
Make case_convert about a million times faster for long sequences

#18 ExplodingCabbage closed 5 years ago
1
Calling model_fitting.R does not work with Bioconda

#17 karel-brinda opened 5 years ago
0
Fix bugs preventing tool from working on short reference sequences

#16 ExplodingCabbage closed 5 years ago
0
Remove an unneeded TODO

#15 ExplodingCabbage closed 5 years ago
4
add R9.4 1D ecoli profile

#14 mbhall88 closed 5 years ago
0
Create R9.4 E. coli profile

#13 mbhall88 opened 5 years ago
7
Create snakemake wrapper

#12 mbhall88 closed 5 years ago
3
Synchronise with latest nanosim

#11 mbhall88 opened 5 years ago
0
Accept Gzip as input

#10 mbhall88 opened 5 years ago
3
A short "genome" sequence causes a hang, not a fail

#9 rmcolq opened 5 years ago
8
Multiple little improvements

#8 karel-brinda closed 6 years ago
0
Fix indentation in simulate.py

#7 wfranus closed 6 years ago
1
creating fastq files?

#6 nick-youngblut closed 6 years ago
3
Difference between NanoSim-H and Nanosim

#5 wyzhangMPI closed 6 years ago
1
Problems with simulated.log

#4 karel-brinda opened 7 years ago
0
RNF names might have invalid chrom ids

#3 karel-brinda opened 7 years ago
0
NanoSim-H 1.1.0.0

#2 karel-brinda closed 7 years ago
0
Update readme

#1 karel-brinda closed 7 years ago
0