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kauwelab
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PolyRiskScore
PRSKB is a website and command-line interface tool for calculating polygenic risk scores using GWA studies from the NHGRI-EBI Catalog.
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Output with risk/protective allele for each rs ID
#436
PattSS
opened
1 day ago
0
PyVCF Compatibility with Python 3.11+
#435
miller34
opened
4 weeks ago
0
Suggestion to add imputation by reference allele
#434
mfasold
opened
2 months ago
1
Percentile value not reported when the input file format is VCF
#433
mfasold
opened
3 months ago
0
Offline Mode
#432
ngslabex
closed
4 weeks ago
2
GWAS summary statistics uploading
#431
alisonomica
closed
7 months ago
2
ERROR DURING CALCULATION... Quitting - While using PolyRiskScore/static/sample.vcf
#430
alisondiazc
closed
7 months ago
2
Bump minimist from 1.2.5 to 1.2.8
#429
dependabot[bot]
opened
1 year ago
0
Bump sequelize from 5.22.4 to 6.29.0
#428
dependabot[bot]
opened
1 year ago
0
Bump sequelize from 5.22.4 to 6.28.2
#427
dependabot[bot]
closed
1 year ago
1
Comparison to PRSIce-2
#426
erskck1
closed
1 year ago
3
P-Value Threshold for Associations (-c)
#425
erskck1
closed
1 year ago
4
Bump cacheable-request and nodemon
#424
dependabot[bot]
opened
1 year ago
0
Bump http-cache-semantics and npm
#423
dependabot[bot]
opened
1 year ago
0
Bump express from 4.17.1 to 4.17.3
#422
dependabot[bot]
opened
1 year ago
0
Bump qs, body-parser and express
#421
dependabot[bot]
opened
1 year ago
0
Bump decode-uri-component from 0.2.0 to 0.2.2
#420
dependabot[bot]
opened
1 year ago
0
Double check that we give them the option to upload a .txt file. This is looking like they can't but we should be able to handle that.
#419
mpage21
closed
7 months ago
1
Bump @xmldom/xmldom from 0.7.5 to 0.7.8
#418
dependabot[bot]
opened
1 year ago
0
"View our Manuscript" on 'about' page giving access denied
#417
mpage21
closed
1 year ago
1
Link to paper missing on studies page
#416
mpage21
closed
1 year ago
1
QC steps for target data
#415
erskck1
closed
1 year ago
3
tables/study_table.tsv
#414
erskck1
closed
1 year ago
7
Bump @xmldom/xmldom from 0.7.5 to 0.7.6
#413
dependabot[bot]
closed
1 year ago
1
Add paper links
#412
MattCloward
closed
1 year ago
0
Bump moment-timezone from 0.5.34 to 0.5.37
#411
dependabot[bot]
opened
1 year ago
0
clarified error message
#410
MattCloward
closed
1 year ago
0
Web text input fixes
#409
MattCloward
closed
1 year ago
0
Falsely claiming duplicated SNPs
#408
tantrev
closed
1 year ago
1
updated web tour with imputation
#407
MattCloward
closed
2 years ago
0
Minor cli fixes
#406
MattCloward
closed
2 years ago
0
JSON CLI crash fix
#405
MattCloward
closed
2 years ago
0
Changed to always download all the studies on CLI
#404
mpage21
closed
2 years ago
0
fixed web
#403
mpage21
closed
2 years ago
0
Auto database update fixes
#402
MattCloward
closed
2 years ago
0
added super pop requirement to web and CLI GWAS
#401
MattCloward
closed
2 years ago
0
whoops don't need to have that check there
#400
mpage21
closed
2 years ago
0
Don't include studies that have no overlap
#399
mpage21
closed
2 years ago
0
Bump moment from 2.29.1 to 2.29.2
#398
dependabot[bot]
closed
2 years ago
0
Website tour update
#397
MattCloward
closed
2 years ago
0
Finish up todos
#396
mpage21
closed
2 years ago
0
added checks for duplicated snps in user input
#395
mpage21
closed
2 years ago
0
Update docs
#394
mpage21
closed
2 years ago
0
updated limits
#393
mpage21
closed
2 years ago
0
Fix timeout issue on website
#392
mpage21
closed
2 years ago
0
fixed printing the numbers
#391
mpage21
closed
2 years ago
0
Addin percentiles
#390
mpage21
closed
2 years ago
0
made more changes to filtering - should be all fixed
#389
mpage21
closed
2 years ago
0
studyID filtering is working
#388
mpage21
closed
2 years ago
0
Todos and filename fix
#387
mpage21
closed
2 years ago
0
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