kkang7 CDSeq_R_Package issues

kkang7 / CDSeq_R_Package

CDSeq R Package

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issues

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Error in `contrasts<-`(`*tmp*`, value = contr.funs[1 + isOF[nn]])

#26 troysgit opened 1 year ago
1
there s a tie between two or more possible cell type annotations

#25 BioRB opened 1 year ago
1
How to assign cell types without either reference GEP or single-cell?

#24 m-leclercq opened 1 year ago
3
can't install the CDSeq package

#23 NOVOLAND749 opened 1 year ago
1
estProp always even across types

#22 umasstr opened 1 year ago
3
sc_gep and sc_annotation

#21 levinhein opened 1 year ago
0
Run time of CDSeq()

#20 levinhein closed 1 year ago
1
Limited by default 500. How can we provide/calculate "gene_length" and "reference_gep"?

#19 levinhein opened 1 year ago
4
.

#18 levinhein closed 1 year ago
0
Renaming clusters after cellTypeAssignSCRNA?

#17 FrankStarling closed 1 year ago
0
Undefined variable in vignette?

#16 FrankStarling closed 1 year ago
0
CDSeq not available for R 4.2?

#15 arielah closed 1 year ago
2
length(gene_length) should be equal to nrow(bulk_data)

#14 nbutyrate opened 2 years ago
1
don't import RcppThread namespace

#13 tnagler closed 6 months ago
0
input to cellTypeAssignSCRNA

#12 gbonifazi opened 2 years ago
4
Remove compiled files from the src directory

#11 grst opened 2 years ago
0
CDSeq running in parallel

#10 gbonifazi closed 2 years ago
0
Release Version

#9 PelzKo opened 2 years ago
0
warning messages with CDSeq

#8 nandakumaryellapu opened 3 years ago
0
Input for CDSeq?

#7 merlevede closed 3 years ago
2
Including known cell type proportions in CDSeq initial deconvolution

#6 emmawwinchester closed 3 years ago
1
Error in CDSeq()

#5 RK1912 closed 3 years ago
0
Error in CDSeq()

#4 RK1912 closed 3 years ago
5
question about scRNA-seq data and thetheory of CDSeq

#3 caiquanyou closed 3 years ago
10
No reference Gene expression profiles

#2 antgomo closed 4 years ago
1
Specific cell type expression matrix

#1 antgomo closed 4 years ago
12