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lhqing
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cemba_data
Mapping pipeline for snmC-seq based technologies.
https://hq-1.gitbook.io/mc/
MIT License
15
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Bug: cutadapt adapter trimming with default 3 bases overlap instead of 6 - bug in Snakemake templates
#21
mbatiuk
opened
5 months ago
0
pipeline installation fails on pip install allcools - libxcrypt dependency is required
#20
mbatiuk
opened
5 months ago
0
outdated manual at https://hq-1.gitbook.io/mc
#19
mbatiuk
opened
5 months ago
0
bismark_reference is not defined in Snakefile
#18
mbatiuk
opened
5 months ago
0
yap: error: unrecognized arguments (yap start-from-cell-fastq)
#17
Yoon-Insoo
closed
6 months ago
0
potential error in yap make-sample-sheet plateinfo_and_samplesheet.py
#16
MichaelPeibo
opened
9 months ago
1
Value Error rised when running default-mapping-config
#15
TinaXiayanLi
opened
11 months ago
0
Update fastq_dataframe.py
#14
jksr
opened
1 year ago
0
fix mc_merge_multigroup
#13
jksr
closed
2 years ago
0
add allc merging method from multiple groups
#12
jksr
closed
2 years ago
0
fastq pattern path error in demultiplex
#11
emarti88
closed
3 years ago
4
Update mc.Snakefile
#10
jksr
closed
3 years ago
5
installation error
#9
Addicted-to-coding
closed
3 years ago
0
changes about file names
#8
lhqing
closed
3 years ago
0
incomplete fasta qc file
#7
jksr
closed
3 years ago
2
Bismark / Bowtie not writing output to directory
#6
manoj-hariharan
closed
3 years ago
1
mc template
#5
jksr
closed
3 years ago
2
mc and sbatch
#4
jksr
closed
3 years ago
2
demultiplex
#3
zhoujt1994
closed
3 years ago
2
fix summary bug
#2
jksr
closed
4 years ago
0
Update mapping
#1
lhqing
closed
5 years ago
0