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mac-theobio
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McMasterPandemic
SEIR+ model
GNU General Public License v3.0
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Confusing behaviour when adding or removing time-varying parameters that are not calibrated
#243
stevencarlislewalker
opened
8 months ago
0
possible bug when using `update_params()` on `flexmodel_to_calibrate` objects
#242
papsti
opened
1 year ago
0
shiny app link not found
#241
carolinecolijn
closed
1 year ago
3
update contributors
#240
stevencarlislewalker
opened
1 year ago
1
remotes::install_github() times out with non-obvious error message
#239
papsti
opened
1 year ago
2
Credible intervals for `pars_base_opt` and `pars_time_opt`
#238
stevencarlislewalker
opened
1 year ago
0
Time-varying R0
#237
stevencarlislewalker
opened
1 year ago
0
pars_time_hist bugs
#236
stevencarlislewalker
opened
1 year ago
0
lagged difference variables = 0 in forecast ensemble after last observation
#235
papsti
closed
2 years ago
5
Compartmental model space paper
#234
stevencarlislewalker
closed
1 year ago
0
Summary Statistics in Guide and Software
#233
stevencarlislewalker
opened
2 years ago
0
Concern about R0 calculation for vaxified models
#232
stevencarlislewalker
opened
2 years ago
0
passing all data to TMB as matrices
#231
stevencarlislewalker
closed
3 months ago
0
macpan guide enhancements
#230
stevencarlislewalker
opened
2 years ago
0
Different error message for calibration start date being equal to the first observation date
#229
papsti
opened
2 years ago
0
Warning when symbols provided in params and/or state vectors are not used in `flexmodel` model definition
#228
papsti
opened
2 years ago
0
Change add/update functions to have a consistent naming scheme and behaviour
#227
stevencarlislewalker
opened
2 years ago
2
c++ index misalignment occurs when updated time-variation adds new rates to the simulation history after convolutions and/or lagged differences have been specified
#226
stevencarlislewalker
closed
2 years ago
1
Implement More Models
#225
stevencarlislewalker
opened
2 years ago
0
Ensemble forecasting with time-variation of parameters in the forecast period may not be working properly
#224
stevencarlislewalker
closed
2 years ago
0
Time varying 'multiplication' on different scales (e.g. logit)
#223
stevencarlislewalker
closed
2 years ago
0
Ageify model in flexmodel framework
#222
stevencarlislewalker
closed
2 years ago
1
Determine R package with which to integrate for building compartmental flow diagrams
#221
stevencarlislewalker
opened
2 years ago
0
Allow for exponents and powers in rate expressions
#220
stevencarlislewalker
closed
2 years ago
0
Assess model structure proposals against models of sexual transmission
#219
stevencarlislewalker
opened
2 years ago
0
More Loss Functions
#218
stevencarlislewalker
closed
1 year ago
0
warnings occurring when calibrating macpan with wastewater model
#217
mayaearn
opened
2 years ago
0
non-positive definite covariance matrix troubleshooting section
#216
stevencarlislewalker
opened
2 years ago
0
github action for building and deploying the bookdown guide
#215
stevencarlislewalker
closed
2 years ago
3
confusion over plot of 'classic'
#214
bbolker
closed
2 years ago
2
R CMD Check GitHub Action is Failing
#213
stevencarlislewalker
closed
2 years ago
1
Remove plots from tests
#212
stevencarlislewalker
opened
2 years ago
0
Why/why not refactor rate formulas
#211
stevencarlislewalker
opened
2 years ago
0
Working minimal formal class structure
#210
stevencarlislewalker
opened
2 years ago
0
Learning key pieces of macpan
#209
stevencarlislewalker
closed
2 years ago
0
Test the synthesized 'product model' framework from #207 against classic macpan usecases
#208
stevencarlislewalker
closed
2 years ago
1
Model Structure Reading List
#207
stevencarlislewalker
closed
2 years ago
0
Try out new AD library within TMB
#206
bbolker
opened
2 years ago
0
"Error in `delay_cv^2`: non-numeric argument to binary operator"
#205
stevencarlislewalker
closed
2 years ago
0
Smooth Lower-Bound Constraint on Negative Binomial Means
#204
stevencarlislewalker
closed
2 years ago
0
cumulative sums of any variable in `simulation_history` to support the `cumRep` feature in MacPan
#203
stevencarlislewalker
opened
2 years ago
0
timevar_order_indices is never used
#202
stevencarlislewalker
opened
2 years ago
0
Length-zero date construction fails on Windows R4.0.0
#201
stevencarlislewalker
closed
2 years ago
2
Inconsistency in testing infrastructure
#200
stevencarlislewalker
opened
2 years ago
0
Return untransformed parameters in the tmb report on tmb-condense
#199
stevencarlislewalker
closed
2 years ago
0
Rd file describing formula syntax
#198
stevencarlislewalker
opened
2 years ago
1
Why does this script return NaN?
#197
stevencarlislewalker
closed
2 years ago
3
1.0.0 release process
#196
stevencarlislewalker
opened
2 years ago
0
Merge master back into tmb and silence tests
#195
stevencarlislewalker
closed
2 years ago
0
tmb-condense branch segfaults when c++ make_state function is called
#194
stevencarlislewalker
closed
2 years ago
5
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