matchms ms2deepscore issues

matchms / ms2deepscore

Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity

Apache License 2.0

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issues

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Added macos-14 (M1 chip) to CI-Build

#221 niekdejonge opened 1 week ago
1
Binning width somewhat unexpected.

#220 niekdejonge closed 4 days ago
2
Issues installing in M1 conda environment

#219 j-berg opened 1 week ago
6
Mismatching model on the MS2Deepscore V2.0 Zenodo repository?

#218 AharoniLab opened 2 weeks ago
1
Change exception to warning when wrong ionmode

#217 niekdejonge opened 1 month ago
0
Missing SpectrumBinner

#216 asmirn1 opened 1 month ago
6
Export for java

#215 niekdejonge opened 2 months ago
0
Update figure size

#214 niekdejonge closed 3 months ago
1
Update notebooks

#213 niekdejonge closed 3 months ago
0
Update notebooks

#212 niekdejonge closed 3 months ago
0
Add check for known loss function

#211 niekdejonge closed 3 months ago
1
Type check settings

#210 niekdejonge closed 3 months ago
0
Add tensorboard

#209 florian-huber opened 4 months ago
0
Add embedding evaluator to pipeline

#208 niekdejonge opened 4 months ago
1
Split SettingsMS2Deepscore and SettingsEvaluationModel

#207 niekdejonge closed 4 months ago
1
Integrate train in class

#206 niekdejonge closed 4 months ago
1
Add tensorboard to monitor trainings

#205 florian-huber opened 4 months ago
0
Consider combining different "MS2DeepScore 2" models into one class

#204 florian-huber opened 4 months ago
2
Move training functions into model classes

#203 florian-huber opened 4 months ago
2
Update plotting and small bug fixes

#202 niekdejonge closed 4 months ago
0
Add embedding evaluation model

#201 florian-huber closed 4 months ago
0
Remove M1 chip compatibility

#200 niekdejonge closed 5 months ago
2
Mac 1 chip results in wrong results

#199 niekdejonge closed 4 months ago
4
Cleanup wrappers

#198 florian-huber closed 5 months ago
0
fix tests

#197 florian-huber closed 5 months ago
0
Minor bug in pair selection algorithm

#196 florian-huber closed 5 months ago
1
Fix suggestions

#195 niekdejonge closed 5 months ago
1
Small fixes

#194 niekdejonge closed 5 months ago
1
Check for hardcoded parameters (potentially conflicts with settings)

#193 florian-huber closed 5 months ago
1
add intensity sum functions

#192 florian-huber closed 5 months ago
1
Add new version of MonteCarlo-Dropout

#191 florian-huber closed 5 months ago
1
Reconsider settings class

#190 niekdejonge opened 5 months ago
0
Integrate settings

#189 niekdejonge closed 5 months ago
0
Add a few tests and minor edits

#188 florian-huber closed 5 months ago
2
add some imports to __init__ (while avoiding circular imports)

#187 florian-huber closed 5 months ago
1
fix wrong default

#186 florian-huber closed 5 months ago
2
switch to current rng_default option for validation loss generator

#185 florian-huber opened 5 months ago
0
move some imports (using __init__ files)

#184 florian-huber opened 5 months ago
0
Update Changelog

#183 florian-huber closed 3 months ago
2
Start collecting changes --> version 2.0 in Changelog

#182 florian-huber opened 5 months ago
0
Speed up tests by training smaller models.

#181 florian-huber closed 5 months ago
1
Consider switching to `black` style

#180 florian-huber opened 5 months ago
0
finalize issue 177

#179 niekdejonge closed 5 months ago
1
Add more extensive+efficient validation function

#178 florian-huber closed 5 months ago
1
Add more efficient validation function

#177 florian-huber closed 5 months ago
1
Save version

#176 niekdejonge closed 5 months ago
2
Update `MS2DeepScoreMonteCarlo` to pytorch

#175 florian-huber closed 5 months ago
1
Remove redundant functions

#174 niekdejonge closed 5 months ago
1
renaming, refactoring, removing old parts

#173 florian-huber closed 5 months ago
0
Create fully deterministic validation generator

#172 florian-huber closed 5 months ago
3