matthiaskoenig cy3sbml issues

matthiaskoenig / cy3sbml

cy3sbml: SBML for Cytoscape 3

GNU Lesser General Public License v3.0

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issues

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Problems with distrib package

#334 matthiaskoenig opened 5 months ago
0
Bump jackson-databind from 2.11.0 to 2.12.7.1

#333 dependabot[bot] opened 1 year ago
0
Bump woodstox-core from 5.0.1 to 5.4.0

#332 dependabot[bot] opened 1 year ago
0
Bump jackson-databind from 2.11.0 to 2.13.4.1

#331 dependabot[bot] closed 1 year ago
1
Bump jackson-databind from 2.11.0 to 2.12.6.1

#330 dependabot[bot] closed 1 year ago
1
Stoichiometry not displayed

#329 bbarker closed 1 year ago
1
Update uniprotjapi

#328 matthiaskoenig opened 1 year ago
0
Bump xstream from 1.4.9 to 1.4.19

#327 dependabot[bot] opened 2 years ago
0
Add reversibility arrow for reversible processes (different arrow head)

#326 matthiaskoenig opened 2 years ago
0
New JSBML version with log4j 2.17.1

#325 AlexanderPico opened 2 years ago
0
Bump xstream from 1.4.9 to 1.4.18

#324 dependabot[bot] closed 2 years ago
1
Bump httpclient from 4.5.12 to 4.5.13

#323 dependabot[bot] opened 3 years ago
0
Bump xstream from 1.4.9 to 1.4.17

#322 dependabot[bot] closed 2 years ago
1
Bump commons-io from 2.6 to 2.7

#321 dependabot[bot] opened 3 years ago
0
unable to import zebrafish metabolic model in xml into Cytoscape

#320 MafGal opened 3 years ago
2
Bump xstream from 1.4.9 to 1.4.16

#319 dependabot[bot] closed 3 years ago
1
Bump xstream from 1.4.9 to 1.4.15

#318 dependabot[bot] closed 3 years ago
1
Update UniProtJAPI

#317 matthiaskoenig opened 3 years ago
1
Bump xstream from 1.4.9 to 1.4.13-java7

#316 dependabot[bot] closed 3 years ago
1
Bump junit from 4.13 to 4.13.1

#315 dependabot[bot] opened 3 years ago
0
Bump xstream from 1.4.9 to 1.4.10-java7

#314 dependabot[bot] closed 3 years ago
1
Issue with reading SBML Test suite

#313 matthiaskoenig opened 4 years ago
0
Cytoscape App Store: add the "systems biology" tag?

#312 bdelepine closed 4 years ago
1
Update bigg models to v1.6

#311 matthiaskoenig opened 4 years ago
0
Travis tests are failing

#310 matthiaskoenig opened 4 years ago
0
java long deprecation warnings in Java11

#309 matthiaskoenig closed 4 years ago
1
Incorrect prefix for SBO annotations created

#308 matthiaskoenig opened 4 years ago
0
Upgrade com.fasterxml.jackson.core:jackson-databind to version 2.9.10.4 or later.

#307 matthiaskoenig closed 4 years ago
0
Update installation instructions for Cytoscape 3.8.0 and openjdk

#306 matthiaskoenig closed 4 years ago
0
Bump jackson-databind from 2.9.10.3 to 2.9.10.4

#305 dependabot[bot] closed 4 years ago
1
Update uniprot api

#304 matthiaskoenig closed 4 years ago
0
Update to JSBML-1.5-SNAPSHOT

#303 matthiaskoenig closed 4 years ago
0
Update to openjdk-11 and Cytoscape 3.8.0

#302 matthiaskoenig closed 4 years ago
0
Security vulnerability in com.fasterxml.jackson.core:jackson-databind

#301 matthiaskoenig closed 4 years ago
0
Bump jackson-databind from 2.9.9.3 to 2.9.10.3

#300 dependabot[bot] closed 4 years ago
1
Uniprot information not displayed/retrieved

#299 matthiaskoenig opened 4 years ago
0
Font awsome icons not loaded in javafx

#298 matthiaskoenig opened 4 years ago
0
https://identifiers.org/ prefixes cannot be resolved as collection

#297 matthiaskoenig closed 4 years ago
0
Bump jackson-databind from 2.9.9.3 to 2.9.10.1

#296 dependabot[bot] closed 4 years ago
1
Error in parsing filename if no model id exists on windows

#295 davidhoksza opened 4 years ago
5
Move release information to markdown

#294 matthiaskoenig opened 4 years ago
0
Changes for v0.3.0

#293 matthiaskoenig closed 4 years ago
0
Travis no longer working with java 8

#292 matthiaskoenig closed 4 years ago
1
Update to new identifiers.org registry information

#291 matthiaskoenig opened 4 years ago
0
Bump xstream from 1.4.9 to 1.4.11.1

#290 dependabot[bot] closed 4 years ago
1
java.lang.reflect.InvocationTargetException: null on SBML loading

#289 matthiaskoenig opened 4 years ago
0
Problem in registering plugin for SBML correctly

#288 matthiaskoenig closed 4 years ago
1
Update jsbml dependencies

#287 matthiaskoenig closed 4 years ago
0
Bump xstream from 1.3.1 to 1.4.6

#286 dependabot[bot] closed 4 years ago
1
Update develop dependency to Cytoscape 3.7.1

#285 matthiaskoenig closed 4 years ago
0