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matthiaskoenig
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cy3sbml
cy3sbml: SBML for Cytoscape 3
GNU Lesser General Public License v3.0
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Automation feature for cy3sbml
#284
mkutmon
opened
5 years ago
0
Identifiers.org new identifiers pattern not working
#283
matthiaskoenig
opened
5 years ago
0
Update jackson databind
#282
matthiaskoenig
closed
4 years ago
0
Distrib support
#281
matthiaskoenig
opened
5 years ago
0
Problems when exporting image as SIF
#280
matthiaskoenig
opened
5 years ago
0
Updated biomodels api and bugfixes
#279
matthiaskoenig
closed
5 years ago
0
Test latest BiGG models (release v1.5)
#278
matthiaskoenig
closed
5 years ago
0
Uniprot information not displayed: AvroTypeException: No match for ACTIVITY_REGULATION
#277
matthiaskoenig
closed
5 years ago
1
Uniprot information not displayed - AvroTypeException: No match for ENZYME_REGULATION
#276
matthiaskoenig
closed
5 years ago
0
Update Uniprot japi
#275
matthiaskoenig
closed
5 years ago
0
Update to uniprot japi 1.0.22
#274
matthiaskoenig
closed
5 years ago
1
Update to JavaFX11 and controlsFX
#273
matthiaskoenig
closed
4 years ago
1
Update to uniprot JAPI 1.0.21
#272
matthiaskoenig
closed
5 years ago
1
Update to JSBML 1.4
#271
matthiaskoenig
closed
5 years ago
0
Update screenshots and documentation
#270
matthiaskoenig
closed
5 years ago
1
Problems with missing strict tags on fbc
#269
matthiaskoenig
closed
6 years ago
1
Update uniprot to 1.0.19
#268
matthiaskoenig
closed
6 years ago
0
Update OLS library for new endpoints
#267
matthiaskoenig
closed
6 years ago
1
Update uniprot library
#266
matthiaskoenig
closed
6 years ago
0
NCIT annotations not resolved via OLS
#265
matthiaskoenig
closed
6 years ago
1
Miriam registry file location changed
#264
matthiaskoenig
closed
6 years ago
0
Some OLS registries are not resolving information
#263
matthiaskoenig
closed
6 years ago
0
Inline units of math not printed
#262
matthiaskoenig
opened
6 years ago
0
derivedUnits of kineticLaws are often invalid
#261
matthiaskoenig
closed
6 years ago
0
Update JSBML dependencies to latest develop to test derivedUnits bug
#260
matthiaskoenig
closed
6 years ago
0
Bug in naming networks if models have number suffixes
#259
matthiaskoenig
closed
6 years ago
1
Update uniprotjapi
#258
matthiaskoenig
closed
6 years ago
0
Update sbml-test-suite 3.2.0 -> 3.3.0
#257
matthiaskoenig
closed
6 years ago
0
java.lang.NullPointerException when getting derivedUnits of some reactions
#256
matthiaskoenig
closed
6 years ago
1
Update JSBML to 1.3
#255
matthiaskoenig
closed
6 years ago
1
Provide access to alternative formats for given query (Matlab, BioPAX level 2 und 3, ...)
#254
matthiaskoenig
closed
6 years ago
1
Update build dependencies and documentation to Cy3.6
#253
matthiaskoenig
closed
5 years ago
1
Fix icon sizes for Cy3.7 (now requires 32x32 icons)
#252
matthiaskoenig
closed
4 years ago
0
changes and bugfixes for v0.2.7
#251
matthiaskoenig
closed
6 years ago
0
Escaping of all fields which could contain "<" or ">" for html display
#250
matthiaskoenig
opened
6 years ago
0
Some errors in styles on startup
#249
matthiaskoenig
closed
4 years ago
2
New uniprot release, requires update of libraries
#248
matthiaskoenig
closed
6 years ago
1
Fix deprecated fbc methods
#247
matthiaskoenig
closed
6 years ago
1
Test with latest BiGG model release v1.4
#246
matthiaskoenig
closed
6 years ago
0
Changes for release v0.2.6
#245
matthiaskoenig
closed
6 years ago
0
Remove RO and dependencies, update libraries
#244
matthiaskoenig
closed
6 years ago
0
SBO definition/description not set in OLS
#243
matthiaskoenig
closed
6 years ago
3
SBO ontology not resolved (HTML display)
#242
matthiaskoenig
closed
6 years ago
0
FileNotFoundException due to http->https move of miriam registry breaks all latest cy3sbml versions
#241
matthiaskoenig
closed
6 years ago
0
Update latest uniprot
#240
matthiaskoenig
closed
6 years ago
2
Update test cases to latest biomodels
#239
matthiaskoenig
closed
6 years ago
0
Reactome interface
#238
matthiaskoenig
closed
5 years ago
1
Changes for release v0.2.5
#237
matthiaskoenig
closed
7 years ago
0
Update libraries to latest versions
#236
matthiaskoenig
closed
6 years ago
1
SIF export for SBML files broken
#235
matthiaskoenig
closed
6 years ago
1
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