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matthiaskoenig
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cy3sbml
cy3sbml: SBML for Cytoscape 3
GNU Lesser General Public License v3.0
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Problems with distrib package
#334
matthiaskoenig
opened
7 months ago
0
Bump jackson-databind from 2.11.0 to 2.12.7.1
#333
dependabot[bot]
opened
1 year ago
0
Bump woodstox-core from 5.0.1 to 5.4.0
#332
dependabot[bot]
opened
1 year ago
0
Bump jackson-databind from 2.11.0 to 2.13.4.1
#331
dependabot[bot]
closed
1 year ago
1
Bump jackson-databind from 2.11.0 to 2.12.6.1
#330
dependabot[bot]
closed
1 year ago
1
Stoichiometry not displayed
#329
bbarker
closed
2 years ago
1
Update uniprotjapi
#328
matthiaskoenig
opened
2 years ago
0
Bump xstream from 1.4.9 to 1.4.19
#327
dependabot[bot]
opened
2 years ago
0
Add reversibility arrow for reversible processes (different arrow head)
#326
matthiaskoenig
opened
2 years ago
0
New JSBML version with log4j 2.17.1
#325
AlexanderPico
opened
2 years ago
0
Bump xstream from 1.4.9 to 1.4.18
#324
dependabot[bot]
closed
2 years ago
1
Bump httpclient from 4.5.12 to 4.5.13
#323
dependabot[bot]
opened
3 years ago
0
Bump xstream from 1.4.9 to 1.4.17
#322
dependabot[bot]
closed
3 years ago
1
Bump commons-io from 2.6 to 2.7
#321
dependabot[bot]
opened
3 years ago
0
unable to import zebrafish metabolic model in xml into Cytoscape
#320
MafGal
opened
3 years ago
2
Bump xstream from 1.4.9 to 1.4.16
#319
dependabot[bot]
closed
3 years ago
1
Bump xstream from 1.4.9 to 1.4.15
#318
dependabot[bot]
closed
3 years ago
1
Update UniProtJAPI
#317
matthiaskoenig
opened
3 years ago
1
Bump xstream from 1.4.9 to 1.4.13-java7
#316
dependabot[bot]
closed
3 years ago
1
Bump junit from 4.13 to 4.13.1
#315
dependabot[bot]
opened
3 years ago
0
Bump xstream from 1.4.9 to 1.4.10-java7
#314
dependabot[bot]
closed
3 years ago
1
Issue with reading SBML Test suite
#313
matthiaskoenig
opened
4 years ago
0
Cytoscape App Store: add the "systems biology" tag?
#312
bdelepine
closed
4 years ago
1
Update bigg models to v1.6
#311
matthiaskoenig
opened
4 years ago
0
Travis tests are failing
#310
matthiaskoenig
opened
4 years ago
0
java long deprecation warnings in Java11
#309
matthiaskoenig
closed
4 years ago
1
Incorrect prefix for SBO annotations created
#308
matthiaskoenig
opened
4 years ago
0
Upgrade com.fasterxml.jackson.core:jackson-databind to version 2.9.10.4 or later.
#307
matthiaskoenig
closed
4 years ago
0
Update installation instructions for Cytoscape 3.8.0 and openjdk
#306
matthiaskoenig
closed
4 years ago
0
Bump jackson-databind from 2.9.10.3 to 2.9.10.4
#305
dependabot[bot]
closed
4 years ago
1
Update uniprot api
#304
matthiaskoenig
closed
4 years ago
0
Update to JSBML-1.5-SNAPSHOT
#303
matthiaskoenig
closed
4 years ago
0
Update to openjdk-11 and Cytoscape 3.8.0
#302
matthiaskoenig
closed
4 years ago
0
Security vulnerability in com.fasterxml.jackson.core:jackson-databind
#301
matthiaskoenig
closed
4 years ago
0
Bump jackson-databind from 2.9.9.3 to 2.9.10.3
#300
dependabot[bot]
closed
4 years ago
1
Uniprot information not displayed/retrieved
#299
matthiaskoenig
opened
4 years ago
0
Font awsome icons not loaded in javafx
#298
matthiaskoenig
opened
4 years ago
0
https://identifiers.org/ prefixes cannot be resolved as collection
#297
matthiaskoenig
closed
4 years ago
0
Bump jackson-databind from 2.9.9.3 to 2.9.10.1
#296
dependabot[bot]
closed
4 years ago
1
Error in parsing filename if no model id exists on windows
#295
davidhoksza
opened
4 years ago
5
Move release information to markdown
#294
matthiaskoenig
opened
4 years ago
0
Changes for v0.3.0
#293
matthiaskoenig
closed
4 years ago
0
Travis no longer working with java 8
#292
matthiaskoenig
closed
4 years ago
1
Update to new identifiers.org registry information
#291
matthiaskoenig
opened
4 years ago
0
Bump xstream from 1.4.9 to 1.4.11.1
#290
dependabot[bot]
closed
4 years ago
1
java.lang.reflect.InvocationTargetException: null on SBML loading
#289
matthiaskoenig
opened
4 years ago
0
Problem in registering plugin for SBML correctly
#288
matthiaskoenig
closed
4 years ago
1
Update jsbml dependencies
#287
matthiaskoenig
closed
4 years ago
0
Bump xstream from 1.3.1 to 1.4.6
#286
dependabot[bot]
closed
4 years ago
1
Update develop dependency to Cytoscape 3.7.1
#285
matthiaskoenig
closed
4 years ago
0
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