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medbioinf
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pia
:books: :microscope: PIA - Protein Inference Algorithms
https://github.com/medbioinf/pia
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update of README
#156
julianu
closed
3 years ago
0
License update
#155
julianu
closed
3 years ago
1
compatibility with OpenMS 2.5.0
#154
julianu
closed
3 years ago
1
updated dependencies
#153
julianu
closed
3 years ago
1
Bump xercesImpl from 2.11.0 to 2.12.0
#152
dependabot[bot]
closed
3 years ago
3
Updates in JAXB dependency
#151
julianu
closed
4 years ago
1
XML export error
#150
bittremieux
closed
4 years ago
4
Specify score column in mzTab file
#149
bittremieux
closed
4 years ago
3
Adding FDR
#148
ypriverol
closed
4 years ago
5
small changes in README
#147
julianu
closed
4 years ago
0
example to retrieve peptide statistics data after protein inference
#146
julianu
closed
5 years ago
1
Minor changes in the PRIDE XML reader.
#145
ypriverol
closed
4 years ago
3
current version of jMzIdentML cannot read back version 1.2 files
#144
julianu
closed
5 years ago
1
Some more small improvements before new release
#143
julianu
closed
5 years ago
0
The support to Tide is not working properly.
#142
ypriverol
opened
5 years ago
0
Major changes in the pia core.
#141
ypriverol
closed
5 years ago
3
Review the dependency of inspector-ms-graph
#140
ypriverol
closed
5 years ago
2
Code refactoring for HashCode generation
#139
ypriverol
closed
5 years ago
2
Update pom file.
#138
ypriverol
closed
5 years ago
8
fixes a bug, which prevented exporting of PSMs and proteins together in mzTab
#137
julianu
closed
5 years ago
1
New PR
#136
ypriverol
closed
5 years ago
1
Export to mztab with Protein + PSMs is not working
#135
ypriverol
closed
3 years ago
1
Error in mzTab Parser reading the identification protocols affect the Generation of Compiler file
#134
ypriverol
opened
5 years ago
1
PSM ms_run[] get repeated in mztab export.
#133
ypriverol
closed
10 months ago
4
Error fixing when input mzTab do not contains proteins.
#132
ypriverol
closed
5 years ago
1
Export not working combined PSM + Proteins in the mzTab
#131
ypriverol
closed
5 years ago
1
Filtering not working
#130
ypriverol
closed
5 years ago
2
Can we do a new release.
#129
ypriverol
closed
5 years ago
2
fixing coding issues
#128
julianu
closed
5 years ago
1
Json or Yaml config file.
#127
ypriverol
closed
10 months ago
1
Phosphorylation localisation score, fdr.
#126
ypriverol
opened
5 years ago
2
Class FDR, q-values
#125
ypriverol
opened
5 years ago
0
Filters for PSM-Peptides using Search Engine provisioning
#124
ypriverol
opened
5 years ago
3
New filter added about all psm search in all search engines.
#123
ypriverol
closed
5 years ago
2
updates in license
#122
julianu
closed
5 years ago
0
protein q-value filter (and test) added
#121
julianu
closed
5 years ago
1
improved idXML exporter
#120
julianu
closed
5 years ago
1
improved CSV exporter
#119
julianu
closed
5 years ago
1
determination of file type by pre-parsing, not only by suffix
#118
julianu
closed
5 years ago
1
DIA
#117
mchiapello
closed
10 months ago
11
updated native files compiler test
#116
julianu
closed
6 years ago
1
Naming of exported file
#115
robert-winkler
closed
5 years ago
1
Taking time the test running
#114
ypriverol
closed
6 years ago
2
fixing a problem with and adding date from newer idXML files
#113
julianu
closed
6 years ago
0
fixing json typo
#112
julianu
closed
6 years ago
0
removing unnecessary dependency
#111
julianu
closed
6 years ago
0
added setting of visitorCid
#110
julianu
closed
6 years ago
0
updated year and added usage statistics
#109
julianu
closed
6 years ago
1
Question about the -proteinExport function
#108
cksakura
closed
6 years ago
6
fixing an issue with MSF file parsing
#107
julianu
closed
6 years ago
1
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