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merenlab
/
anvio
An analysis and visualization platform for 'omics data
http://merenlab.org/software/anvio
GNU General Public License v3.0
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Replicate genome dendrogram
#2091
lucaz88
closed
1 year ago
3
[BUG] Unable to build KEGG db in non-standard location.
#2090
ac-simpson
closed
11 months ago
2
[BUG] Length mismatch error in anvi-run-hmms
#2089
Ge0rges
closed
1 year ago
8
Config Error of anvi-display-pan
#2088
DanielHan4545
closed
1 year ago
1
UI improvements
#2087
metehaansever
closed
1 year ago
2
[BUG] anvi-setup-ncbi-cogs error
#2086
Miseonn
closed
11 months ago
2
[FEATURE REQUEST] Option to automatically migrate dbs when running `anvi-export-contigs`
#2085
jolespin
closed
1 year ago
3
2043 bug support values can be misplaced in the interactive interface
#2084
metehaansever
closed
7 months ago
3
[DISCUSSION] repeated entry in functional enrichment groups--txt file
#2083
mdrishti
opened
1 year ago
0
[FEATURE REQUEST] Make a better anvi-script-gen-short-reads
#2082
FlorianTrigodet
opened
1 year ago
2
Ancient DNA Profiler
#2081
meren
closed
9 months ago
3
[BUG] Anvi-cluster-contigs with concoct hangs due to OpenBLAS warning
#2080
cedwardson4
closed
1 year ago
1
TypeError with anvi-profile
#2079
roo-weed
closed
1 year ago
3
Genome View: Genome Sliding and Gene Centering
#2078
isaacfink21
closed
1 year ago
0
fix underscore
#2077
mschecht
closed
1 year ago
0
[BUG] SRA download workflow not working
#2076
FlorianTrigodet
closed
1 year ago
2
Genome View: user-defined annotations
#2075
isaacfink21
closed
1 year ago
0
update db version
#2074
JoseLopezArcondo
closed
1 year ago
2
genomeview-backend/metadata notes, saving to state, querying separately
#2073
matthewlawrenceklein
closed
1 year ago
2
Metabolic model IDs
#2072
semiller10
closed
1 year ago
0
New flag for anvi-script-add-default-collection
#2071
meren
closed
1 year ago
0
[BUG] Product attribute in GFF output can include reserved characters
#2070
philipwoods
closed
1 year ago
1
external gene calls with Augustus output
#2069
ereyred
closed
1 year ago
1
[FEATURE REQUEST] Add another option for anvi-script-add-default-collection
#2068
FlorianTrigodet
closed
1 year ago
1
"ValueError: cannot assign slice from input of different size" running anvi-profile
#2067
bpeacock44
closed
1 year ago
8
[BUG] ValueError: too many values to unpack (expected 2)
#2066
rforster1
closed
1 year ago
1
[BUG] Replace this text with a short but descriptive title
#2065
xiongqian123456789
closed
1 year ago
1
Generating docs with GPT-4
#2064
ekiefl
closed
1 month ago
11
Change metabolite IDs in metabolic model file
#2063
semiller10
closed
3 months ago
1
[BUG] anvi-summarize fails with flag '--init-gene-coverages'
#2062
FlorianTrigodet
closed
1 year ago
1
Anvi'o SCG Taxonomy Data for GTDB v207
#2061
meren
closed
1 year ago
0
Updating docs for KEGG snapshot version errors (v8)
#2060
ivagljiva
closed
1 year ago
0
A few functions for generic KEGG downloads (API only)
#2059
ivagljiva
closed
1 year ago
1
Metabolic model generation from (pan)genomes
#2058
semiller10
closed
1 year ago
3
Config Error: There are multiple gene calls in 'file
#2057
neelam19051
closed
1 year ago
1
error in --category variable specification
#2056
neelam19051
closed
11 months ago
1
anvi-self-test error: C extension: /lib64/libm.so.6: version `#GLIBC_2.29' not found
#2055
valc30
closed
1 year ago
1
Function matrix across genomes update
#2054
meren
closed
1 year ago
0
Remove --min-mean-coverage flag
#2053
meren
closed
1 year ago
0
Alignment of gene clusters fails
#2052
lucaz88
closed
1 year ago
3
[BUG] Tidyverse Environment won't solve
#2051
SevanEsaian
closed
11 months ago
4
[BUG] Ecophylo workflow: constraints on hmm_list.txt (hmm_source)
#2050
hdore
opened
1 year ago
4
Inversion error
#2049
metehaansever
closed
11 months ago
0
Anvi run batch
#2048
metehaansever
closed
1 year ago
1
`anvi-profile` error
#2047
tarunaaggarwal
closed
1 year ago
10
2034 feature request button for generate static summary with gene coverages
#2046
metehaansever
closed
1 year ago
2
anvi-gen-genomes-storage error
#2045
Ahmed-Shibl
closed
1 year ago
1
[BUG] anvi-import-taxonomy-for-genes
#2044
d-courtine
closed
1 year ago
2
[BUG] Support values can be misplaced in the interactive interface
#2043
tdelmont
closed
5 months ago
11
[BUG] The collapse of bins in the interface is unstable and often breaks
#2042
tdelmont
opened
1 year ago
1
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