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mhalushka
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miRge
miRge - microRNA alignment software for small RNA-seq data, now at v2.0
GNU General Public License v3.0
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Question about generating libraries for a novel/new species for use in CODA
#37
cement-head
opened
5 months ago
0
annotation.report.csv explanation
#36
Glfrey
closed
1 year ago
1
question about merged miRNAs
#35
hust-yyan
opened
2 years ago
2
No such file or directory: hairpinTmp.fa
#34
vivekruhela
opened
4 years ago
7
local variable 'sequence' referenced before assignment
#33
vivekruhela
closed
4 years ago
4
Mouse library is missing
#32
MCTverheijen
opened
4 years ago
0
Difficulty in getting Novel miRNAs
#31
vivekruhela
opened
4 years ago
1
Installation details
#30
bchatelet
opened
4 years ago
8
No library found for miRNA annotation in zebrafish
#29
stefaniehoho
closed
4 years ago
3
bowtie can't be found in
#28
carolynePearl
closed
4 years ago
3
mirbase id not being found
#27
chelseaherdman
closed
4 years ago
2
Mirge Libraries
#26
kokyriakidis
opened
4 years ago
10
Error trimming files using option: -ad ion
#25
maikelcolli
opened
4 years ago
1
The high proportion Remaining Reads
#24
tianxiahuihui
closed
4 years ago
2
Novel miRNA detection in predict mode crashes with "substring not found"
#23
rjaksik
opened
4 years ago
11
Could not download library file
#22
tianxiahuihui
closed
4 years ago
2
Exited with none-zero status
#21
leontienvdbent
closed
4 years ago
2
Difference between a zero count and an absent record in miR.Counts.csv?
#20
AaronHechmer
opened
5 years ago
2
does predict make sense on same fastq files as input?
#19
thomas-keller
closed
5 years ago
2
writeDataToCSV error
#18
snowlover
closed
5 years ago
6
No miRNA were found in sample
#17
mszabo92
opened
5 years ago
5
How to run miRge2.0 annotate
#16
mtakemura
closed
5 years ago
4
about genome version
#15
conversodinHXL
opened
5 years ago
1
annotata error
#14
lihannan
closed
5 years ago
1
/human/annotation.Libs/human_trna.str does not exsit. Please check it.
#13
ahsen1402
opened
5 years ago
18
Python 2.7 issue
#12
qidi-yang
closed
5 years ago
6
Predict error
#11
lihannan
closed
6 years ago
3
models total_features_namelist.txt is missing when using mirRge in 'Predict' mode (following conda installation instructions)
#10
simon-ty
opened
6 years ago
3
compressed fastq as input
#9
dulveling
opened
6 years ago
7
Paired End Reads
#8
ahsen1402
opened
6 years ago
9
Library file names not as expected for zebrafish
#7
bdemarest
closed
6 years ago
3
Fix typos
#6
roryk
closed
6 years ago
0
Read Length Filtering
#5
ahsen1402
opened
6 years ago
3
Update dependencies to last version in bioconda
#4
lpantano
opened
6 years ago
1
Mapping SNP isomiRs to rs IDs
#3
mshadbolt
opened
6 years ago
1
Could not Download Library Files in China
#2
ijayden-lung
closed
5 years ago
1
miRge Libraries Need to be Updated
#1
ijayden-lung
opened
6 years ago
0