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microbiomedata
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submission-schema
https://microbiomedata.github.io/submission-schema/
MIT License
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What constraints should be applied to "pre-filled" columns
#115
turbomam
closed
5 months ago
1
Make JGIMgInterface Sample Data
#114
brynnz22
closed
1 year ago
1
jgi-mt data examples
#113
brynnz22
closed
1 year ago
1
rna_container_id in JgiMtInterface is still accepting strings > 20 charcters
#112
turbomam
closed
1 year ago
5
let's review which slots serve as identifiers for each template
#111
turbomam
opened
1 year ago
1
update nmdc-schema usage to e8f9bbdf7273dcfd440067067c61cecc5d8a86d9
#110
turbomam
closed
1 year ago
0
update all usages of nmdc-schema to the same recent commit or preferably a release
#109
turbomam
closed
1 year ago
0
Make samp_named required and unique instead of source_mat_id
#108
pkalita-lbl
closed
1 year ago
0
Try merging main into issue 99
#107
turbomam
closed
1 year ago
1
update check-jsonschema and oaklib?
#106
turbomam
closed
1 year ago
0
move these to dev-dependencies: exhaustion-check and gen-pop-linkml2sheets
#105
turbomam
closed
1 year ago
0
move some tool.poetry.dependencies to tool.poetry.dev-dependencies
#104
turbomam
closed
1 year ago
0
inherit tube/plate/well rules from nmdc-schema and provide valid and invalid examples
#103
turbomam
closed
1 year ago
0
Make JGIMtInterface Sample Data
#102
brynnz22
closed
1 year ago
3
Misc minor fixes
#101
pkalita-lbl
closed
1 year ago
1
valid and invalid plant assoc data
#100
turbomam
closed
1 year ago
0
start making plant associated sample data
#99
turbomam
closed
5 months ago
5
mean vs average precipitation slot usage in submission portal
#98
mslarae13
opened
1 year ago
0
generate a usage table from schema alone
#97
turbomam
closed
1 year ago
1
had changes in main; switching between computers
#96
turbomam
closed
1 year ago
0
depth validation broken
#95
mslarae13
closed
1 year ago
11
Shorten underscores in envo enum PVs
#94
pkalita-lbl
closed
1 year ago
0
Restore lost slot attribues
#93
pkalita-lbl
closed
1 year ago
0
update GH pages index page with direct link to SoilInterface
#92
turbomam
opened
1 year ago
1
Provide templates and more guidance about example-derived updates to nmdc-schem or this schema
#91
turbomam
opened
1 year ago
1
Use `template` query param to select initial template if given
#90
pkalita-lbl
closed
1 year ago
1
Is the run time of linkml-run-examples decreased by the post-1.5.0 linkml runtime?
#89
turbomam
closed
1 year ago
1
dh <-> linkml json conversion
#88
turbomam
closed
1 year ago
0
add DH JSON to LinkML and LinkML JSON to DH data converters
#87
turbomam
closed
1 year ago
0
Dependencies and TSV cleanup
#86
turbomam
closed
1 year ago
0
update dependencies and streamline TSV file names
#85
turbomam
closed
1 year ago
0
schemasheets 1.2
#84
turbomam
closed
1 year ago
0
bump to schemasheets 0.1.20 for unsorted keys option
#83
turbomam
closed
1 year ago
0
Too much indentation for the EnvBroadScaleSoilEnum PVs etc
#82
turbomam
closed
5 months ago
10
Go back to un-indented, alphabetized PVs for MIxS environmental slots
#81
turbomam
opened
1 year ago
2
Remove dna/rna organisms and collect_site slots
#80
turbomam
closed
1 year ago
0
Soil mixs env* enums
#79
turbomam
closed
1 year ago
0
enum issues
#78
turbomam
opened
1 year ago
1
If DnaSampleFormatEnum and RnaSampleFormatEnum have the same PVs, could they be be reformulated as a singe enum?
#77
turbomam
opened
1 year ago
6
enum reuse
#76
turbomam
closed
1 year ago
0
dna_dnase boolean
#75
turbomam
closed
1 year ago
0
more direct path to playground
#74
turbomam
closed
1 year ago
0
Illustrations of LinkML and DH JSON differences
#73
turbomam
closed
1 year ago
0
illustrate the differences between DH JSON and LinkML JSON
#72
turbomam
closed
1 year ago
2
This repo and nmdc-schema still have duped domain_of
#71
turbomam
closed
2 months ago
4
cp src/docs/*md docs/ before poetry run mkdocs build -d dist
#70
turbomam
closed
1 year ago
0
updated slot class assignments, esp regarding mixins
#69
turbomam
closed
1 year ago
0
add playground link to about.md
#68
turbomam
closed
1 year ago
0
Commented out *deploy* in Makefile
#67
turbomam
closed
1 year ago
0
MAM try JSON input into DH sandbox
#66
turbomam
closed
1 year ago
1
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